RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 TMEM42Q69YG0 159 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 CLEC9AQ6UXN8 241 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 FAM57BQ71RH2 274 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 RNF144BQ7Z419 303 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 RTN4RL2Q86UN3 420 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 COMMD2Q86X83 199 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 PRR22Q8IZ63 422 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 CMTM1Q8IZ96 169 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 CYB561D1Q8N8Q1 229 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 NAXEQ8NCW5 288 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 OR52M1Q8NGK5 317 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 OR1P1Q8NH06 330 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 OR2V1Q8NHB1 315 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM54Q969K7 222 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 SPTSSAQ969W0 71 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 R3HDM4Q96D70 268 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 ADGRG7Q96K78 797 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 LYZL4Q96KX0 146 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 SPACA5Q96QH8 159 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 GAL3ST4Q96RP7 486 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 RAB40CQ96S21 281 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 CABLES2Q9BTV7 478 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 PARP12Q9H0J9 701 aaKnown RBP6.53□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF160Q9HCG1 818 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF701Q9NV72 531 aaPredicted RBP6.53□□□□□ -1.36
CCDC60-204ENST00000539847 MED29Q9NX70 200 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 SNRNP200O75643 2136 aaKnown RBP6.53□□□□□ -1.36
CCDC60-204ENST00000539847 ANKHD1Q8IWZ3 2542 aaKnown RBP6.52□□□□□ -1.37
CCDC60-204ENST00000539847 HEATR5AQ86XA9 2040 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 IGSF23A1L1A6 192 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 AQP7P3A6NL99 342 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 NPIPA2E9PIF3 369 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 H0YL77 283 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 J3KRW8 73 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 PDCD6O75340 191 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 QDPRP09417 244 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 BCL2P10415 239 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 FABP4P15090 132 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 IL11P20809 199 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 SRP14P37108 136 aaKnown RBP6.52□□□□□ -1.37
CCDC60-204ENST00000539847 FUT6P51993 359 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 FAM3BP58499 235 aaPredicted RBP6.52□□□□□ -1.37
CCDC60-204ENST00000539847 ARG2P78540 354 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 RAB35Q15286 201 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 NSDHLQ15738 373 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 IQCJQ1A5X6 159 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 NMSQ5H8A3 153 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 GFRALQ6UXV0 394 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 TTLL10Q6ZVT0 673 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 GALNTL5Q7Z4T8 443 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 C6orf201Q7Z4U5 140 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 ZNF695Q8IW36 515 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 WDFY1Q8IWB7 410 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 SELENOHQ8IZQ5 122 aaKnown RBP6.52□□□□□ -1.37
CCDC60-204ENST00000539847 RNF152Q8N8N0 203 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 OR5D13Q8NGL4 314 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 OR4X1Q8NH49 305 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 CA5BP1Q8WTZ4 195 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 TMEM18Q96B42 140 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 MISP3Q96FF7 219 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 THOC3Q96J01 351 aaKnown RBP6.52□□□□□ -1.37
CCDC60-204ENST00000539847 RBM14Q96PK6 669 aaKnown RBP6.52□□□□□ -1.37
CCDC60-204ENST00000539847 TAAR6Q96RI8 345 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 LIME1Q9H400 295 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 RIMS4Q9H426 269 aaPredicted RBP6.52□□□□□ -1.37
CCDC60-204ENST00000539847 LRFN1Q9P244 771 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 NAT8Q9UHE5 227 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 TIMM9Q9Y5J7 89 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 LIPGQ9Y5X9 500 aa6.52□□□□□ -1.37
CCDC60-204ENST00000539847 SCN2AQ99250 2005 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 TRGV8A0A0C4DH27 118 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 NKX2-6A6NCS4 301 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 M0R143 59 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 CCL21O00585 134 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 RER1O15258 196 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 PHF1O43189 567 aaPredicted RBP6.51□□□□□ -1.37
CCDC60-204ENST00000539847 XRCC2O43543 280 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 EFNA2O43921 213 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 VENTXO95231 258 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 AMBPP02760 352 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 PGA5P0DJD9 388 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 FAHP16930 419 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 FUT3P21217 361 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 FBLP22087 321 aaKnown RBP6.51□□□□□ -1.37
CCDC60-204ENST00000539847 S100GP29377 79 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 DYNLT3P51808 116 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 ZNF41P51814 821 aaPredicted RBP6.51□□□□□ -1.37
CCDC60-204ENST00000539847 EFNA3P52797 238 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 CLDN15P56746 228 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 ERVFC1-1P60608 527 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 LCN2P80188 198 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 Q0VFX4 171 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 MYBPHQ13203 477 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 TMEM241Q24JQ0 296 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 TMEM249Q2WGJ8 235 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 PLPPR5Q32ZL2 321 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 KRTAP27-1Q3LI81 207 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 SP6Q3SY56 376 aa6.51□□□□□ -1.37
CCDC60-204ENST00000539847 KRTCAP3Q53RY4 240 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms