RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ACSM6Q6P461 480 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 ZNF664Q8N3J9 261 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 TMEM37Q8WXS4 190 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 LOXL4Q96JB6 756 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 AURKAIP1Q9NWT8 199 aaPredicted RBP17.18■□□□□ 0.34
TMEM260-203ENST00000539559 NCOR1O75376 2440 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 BDP1A6H8Y1 2624 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 CYTIPO60759 359 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 ZNF66Q6ZN08 573 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.17■□□□□ 0.34
TMEM260-203ENST00000539559 TAF15Q92804 592 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM260-203ENST00000539559 PRRC2CQ9Y520 2896 aaKnown RBP17.17■□□□□ 0.34
TMEM260-203ENST00000539559 LNP1A1A4G5 178 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 CLDN1O95832 211 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 FOLR3P41439 243 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 RPL23P62829 140 aaKnown RBP17.17■□□□□ 0.34
TMEM260-203ENST00000539559 SLC38A11Q08AI6 406 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 TMEM241Q24JQ0 296 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 OR1P1Q8NH06 330 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 RNF150Q9ULK6 438 aa17.17■□□□□ 0.34
TMEM260-203ENST00000539559 CA6P23280 308 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 GALR1P47211 349 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 HOXA4Q00056 320 aaPredicted RBP17.16■□□□□ 0.34
TMEM260-203ENST00000539559 DCAF12Q5T6F0 453 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 FAM58AQ8N1B3 248 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 NAT8Q9UHE5 227 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 DOCK10Q96BY6 2186 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 HBG1P69891 147 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 HBG2P69892 147 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 PMP22Q01453 160 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 MEF2BQ02080 365 aaPredicted RBP17.16■□□□□ 0.34
TMEM260-203ENST00000539559 USF2Q15853 346 aaPredicted RBP17.16■□□□□ 0.34
TMEM260-203ENST00000539559 BSXQ3C1V8 233 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 SPINK9Q5DT21 86 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 PSMG3Q9BT73 122 aaPredicted RBP17.16■□□□□ 0.34
TMEM260-203ENST00000539559 SRD5A3Q9H8P0 318 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 USF3Q68DE3 2245 aa17.16■□□□□ 0.34
TMEM260-203ENST00000539559 SLC31A2O15432 143 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 JOSD1Q15040 202 aaPredicted RBP17.15■□□□□ 0.34
TMEM260-203ENST00000539559 SAXO1Q8IYX7 474 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 PARLQ9H300 379 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 EGR1P18146 543 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 OR4F5Q8NH21 305 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 OR4F4Q96R69 305 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 P2RX4Q99571 388 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 HES7Q9BYE0 225 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 FUT9Q9Y231 359 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 AHCTF1Q8WYP5 2266 aa17.15■□□□□ 0.34
TMEM260-203ENST00000539559 H7BYZ3 331 aa17.14■□□□□ 0.34
TMEM260-203ENST00000539559 DEGS1O15121 323 aa17.14■□□□□ 0.34
TMEM260-203ENST00000539559 RAMP3O60896 148 aa17.14■□□□□ 0.34
TMEM260-203ENST00000539559 SELEP16581 610 aa17.14■□□□□ 0.34
TMEM260-203ENST00000539559 C3AR1Q16581 482 aa17.14■□□□□ 0.34
TMEM260-203ENST00000539559 OR51G1Q8NGK1 321 aa17.14■□□□□ 0.34
TMEM260-203ENST00000539559 OR5P3Q8WZ94 311 aa17.14■□□□□ 0.34
TMEM260-203ENST00000539559 CLN8Q9UBY8 286 aa17.14■□□□□ 0.34
TMEM260-203ENST00000539559 IDH3GP51553 393 aaPredicted RBP17.14■□□□□ 0.33
TMEM260-203ENST00000539559 SERF2P84101 59 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 APOBEC3DQ96AK3 386 aaPredicted RBP17.14■□□□□ 0.33
TMEM260-203ENST00000539559 TRAPPC2LQ9UL33 140 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 LOXL2Q9Y4K0 774 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 KRASP01116 189 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 IFNA1P01562 189 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 CYP2G1PQ6ZSU1 146 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 FGFRL1Q8N441 504 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 OR5A2Q8NGI9 324 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 OR5R1Q8NH85 324 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 CTDSP1Q9GZU7 261 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 TMEM9BQ9NQ34 198 aa17.14■□□□□ 0.33
TMEM260-203ENST00000539559 PPP5D1E7EU14 171 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 KBTBD11O94819 623 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 IL18BPO95998 194 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 IFNA10P01566 189 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 SLC25A6P12236 298 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 GFRA1P56159 465 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 SSTP61278 116 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 GNB2P62879 340 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 PLA2G2CQ5R387 149 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 LSM10Q969L4 123 aaKnown RBP17.13■□□□□ 0.33
TMEM260-203ENST00000539559 STRADBQ9C0K7 418 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 G6PCP35575 357 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 TFF3Q07654 80 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 ZNF816Q0VGE8 651 aaPredicted RBP17.13■□□□□ 0.33
TMEM260-203ENST00000539559 PPP1R32Q7Z5V6 425 aa17.13■□□□□ 0.33
TMEM260-203ENST00000539559 A0A1B0GUS0 222 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 CEACAM6P40199 344 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 CEBPDP49716 269 aaPredicted RBP17.12■□□□□ 0.33
TMEM260-203ENST00000539559 FAM3BP58499 235 aaPredicted RBP17.12■□□□□ 0.33
TMEM260-203ENST00000539559 ZNF808Q8N4W9 903 aaPredicted RBP17.12■□□□□ 0.33
TMEM260-203ENST00000539559 DRAM1Q8N682 238 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 A8MWP6 167 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 C1QTNF9BB2RNN3 333 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 FGF7P21781 194 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 CHRNA7P36544 502 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 WNT5AP41221 380 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 LINC00205P59089 165 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 TAS2R60P59551 318 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 OR5B12Q96R08 314 aa17.12■□□□□ 0.33
TMEM260-203ENST00000539559 RIMS4Q9H426 269 aaPredicted RBP17.12■□□□□ 0.33
TMEM260-203ENST00000539559 TNRC6AQ8NDV7 1962 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms