RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 IP6K3Q96PC2 410 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 OR2V2Q96R30 315 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 GABARAPL1Q9H0R8 117 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 TLNRD1Q9H1K6 362 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 MED28Q9H204 178 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 C11orf49Q9H6J7 331 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 INIPQ9NRY2 104 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF492Q9P255 531 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF230Q9UIE0 474 aaPredicted RBP1.86□□□□□ -2.11
SNHG1-210ENST00000539303 MMACHCQ9Y4U1 282 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 PCYT1BQ9Y5K3 369 aaPredicted RBP1.86□□□□□ -2.11
SNHG1-210ENST00000539303 RFNGQ9Y644 331 aa1.86□□□□□ -2.11
SNHG1-210ENST00000539303 KIF15Q9NS87 1388 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 NUP205Q92621 2012 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 C7orf66A4D0T2 115 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF850A8MQ14 1090 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 IGLL5B9A064 214 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 PSMD12O00232 456 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-210ENST00000539303 LHBP01229 141 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 IGKV3-11P04433 115 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 GYPCP04921 128 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 GUSBP08236 651 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 FAM228BP0C875 321 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 CD79AP11912 226 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 PTHLHP12272 177 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 MPV17P39210 176 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 MAP2K4P45985 399 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 MARCKSL1P49006 195 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 IFITM2Q01629 132 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF816Q0VGE8 651 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ENDOGQ14249 297 aaKnown RBP1.85□□□□□ -2.11
SNHG1-210ENST00000539303 EDDM3AQ14507 147 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 IHHQ14623 411 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 MMDQ15546 238 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 C1orf194Q5T5A4 169 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 FAM71E1Q6IPT2 247 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 UNQ9165/PRO28630Q6UXU0 137 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF550Q7Z398 422 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 LRRC25Q8N386 305 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-210ENST00000539303 TMEM86BQ8N661 226 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 KRTCAP2Q8N6L1 136 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 SPANXA2-OT1Q8N9U9 137 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ZFP62Q8NB50 900 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-210ENST00000539303 OR1L8Q8NGR8 309 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 RTN4IP1Q8WWV3 396 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-210ENST00000539303 AP3S1Q92572 193 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 CMBLQ96DG6 245 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 C1orf50Q9BV19 199 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ALX4Q9H161 411 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-210ENST00000539303 FAM96AQ9H5X1 160 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 LINC00574Q9H8X3 128 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 TAS2R1Q9NYW7 299 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 IL37Q9NZH6 218 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ARL5AQ9Y689 179 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 COL27A1Q8IZC6 1860 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ARAP3Q8WWN8 1544 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 ZBED9Q6R2W3 1325 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 TRIP11Q15643 1979 aa1.85□□□□□ -2.11
SNHG1-210ENST00000539303 SCN4AP35499 1836 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 TICRRQ7Z2Z1 1910 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 TMED7-TICAM2A0A0A6YYA0 188 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 A6NED7 52 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 EEF1E1-BLOC1S5C9J1V9 151 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 TMEM238C9JI98 176 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 M0R381 172 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 EEF1E1O43324 174 aaKnown RBP1.84□□□□□ -2.11
SNHG1-210ENST00000539303 WISP3O95389 354 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-210ENST00000539303 TRGV3P03979 118 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 FABP1P07148 127 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 OR5G3P0C626 314 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 MUC1P15941 1255 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-210ENST00000539303 TGFBR2P37173 567 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 CA7P43166 264 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 TMEM33P57088 247 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 LINC00313P59037 77 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 BSPH1Q075Z2 132 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 FUT5Q11128 374 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 EIF4EBP1Q13541 118 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-210ENST00000539303 EIF4EBP2Q13542 120 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-210ENST00000539303 PMAIP1Q13794 54 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 PDGFRLQ15198 375 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 SLC9A3R2Q15599 337 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF709Q8N972 641 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 PXT1Q8NFP0 134 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 SLC25A44Q96H78 314 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-210ENST00000539303 PPP1R2P1Q96PQ5 205 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 SIGMAR1Q99720 223 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 ULBP3Q9BZM4 244 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 TRIM4Q9C037 500 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 GID8Q9NWU2 228 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF586Q9NXT0 402 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 DOK5Q9P104 306 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 DHCR7Q9UBM7 475 aaKnown RBP1.84□□□□□ -2.11
SNHG1-210ENST00000539303 PRO0461Q9UI25 63 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 PKIGQ9Y2B9 76 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF835Q9Y2P0 537 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 PRELID3BQ9Y3B1 194 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 WASHC3Q9Y3C0 194 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 FIS1Q9Y3D6 152 aa1.84□□□□□ -2.11
SNHG1-210ENST00000539303 TRAPPC1Q9Y5R8 145 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms