RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 TOMM40LQ969M1 308 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TMBIM1Q969X1 311 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PPCDCQ96CD2 204 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 LRRC58Q96CX6 371 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RCN3Q96D15 328 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RAB3CQ96E17 227 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 YIPF6Q96EC8 236 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SDSLQ96GA7 329 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 BTF3L4Q96K17 158 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC35G5Q96KT7 338 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 NOL4LQ96MY1 436 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 LINC00167Q96N53 147 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ALKBH3Q96Q83 286 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5B12Q96R08 314 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2M2Q96R28 347 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR52E6Q96RD3 313 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ATP5SQ99766 215 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 NKX3-1Q99801 234 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC6A7Q99884 636 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CMSS1Q9BQ75 279 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SUCNR1Q9BXA5 334 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TTTY12Q9BZ98 90 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TBL1XR1Q9BZK7 514 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ACTR3CQ9C0K3 210 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR8D2Q9GZM6 311 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CHST5Q9GZS9 411 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR51I1Q9H343 314 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DPAGT1Q9H3H5 408 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DSN1Q9H410 356 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ANKRD19PQ9H560 264 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ARMC7Q9H6L4 198 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 AMBNQ9NP70 447 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ACKR4Q9NPB9 350 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 B3GAT2Q9NPZ5 323 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 GPR173Q9NS66 373 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ACOXLQ9NUZ1 547 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 MCUBQ9NWR8 336 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM206AQ9NX38 181 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 VNN3Q9NY84 501 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 IL36GQ9NZH8 169 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CCDC167Q9P0B6 97 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CLCF1Q9UBD9 225 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 GHRLQ9UBU3 117 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 B4GALT7Q9UBV7 327 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FBXL2Q9UKC9 423 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 VPREB3Q9UKI3 123 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CELA1Q9UNI1 258 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SSR3Q9UNL2 185 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 B3GALT5Q9Y2C3 310 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC35A3Q9Y2D2 325 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 NSG2Q9Y328 171 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF337Q9Y3M9 751 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RNF115Q9Y4L5 304 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM215AQ9Y5M1 114 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 MTORP42345 2549 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 MXRA5Q9NR99 2828 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ARID1AO14497 2285 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TLN2Q9Y4G6 2542 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 ACANP16112 2415 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 FLNAP21333 2647 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 TRRAPQ9Y4A5 3859 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 LOC102724200A0A096LPH7 203 aaPredicted RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 KIR2DL5BA0A0G2JN68 375 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 KIR2DL5BA0A0G2JPC4 375 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 CENPVL3A0A0U1RRI6 287 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A1B0GW55 424 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 RNF222A6NCQ9 220 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 CCDC182A6NF36 153 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 LRRC30A6NM36 301 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM166BA8MTA8 275 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 C17orf100A8MU93 164 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 LEUTXA8MZ59 168 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 C1orf196B1AJZ1 125 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 M0R143 59 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 SIRPB1O00241 398 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 TP53I11O14683 189 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 CHEK1O14757 476 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 MRASO14807 208 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 WNT9BO14905 357 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 EIF4E2O60573 245 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 TRMUO75648 421 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 ATG12O94817 140 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 TOXO94900 526 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 CDS2O95674 445 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM50AO95807 157 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 HLA-AP01891 365 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 HLA-HP01893 362 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 C1QBP02746 253 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 RLN2P04090 185 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 CD74P04233 296 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 PRB1P04280 392 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 CSN3P07498 182 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 HTR1AP08908 422 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 HOXD4P09016 255 aaPredicted RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 HOXB5P09067 269 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 CST2P09228 141 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 ASAH2BP0C7U1 165 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 DANCRP0C864 163 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 DUX4L2P0CJ85 424 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 DUX4L3P0CJ86 424 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms