RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 HS3ST6Q96QI5 342 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 PRDM6Q9NQX0 595 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 A0A1W2PR77 199 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 RAET1LQ5VY80 246 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 OR8G2PQ6IF36 304 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 RABEPKQ7Z6M1 372 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 PRR18Q8N4B5 295 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 HLA-CQ95604 372 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 SPSB4Q96A44 273 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 OR2H1Q9GZK4 316 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 OR2J1Q9GZK6 312 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 TMEM9BQ9NQ34 198 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 EML6Q6ZMW3 1958 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 TMPRSS2O15393 492 aa15.77■□□□□ 0.12
SFSWAP-207ENST00000538548 GALR2O43603 387 aaPredicted RBP15.77■□□□□ 0.12
SFSWAP-207ENST00000538548 UMODP07911 640 aa15.77■□□□□ 0.12
SFSWAP-207ENST00000538548 EDN3P14138 238 aa15.77■□□□□ 0.12
SFSWAP-207ENST00000538548 TPPP2P59282 170 aa15.77■□□□□ 0.12
SFSWAP-207ENST00000538548 ANKRD39Q53RE8 183 aa15.77■□□□□ 0.12
SFSWAP-207ENST00000538548 Q6ZWC4 215 aa15.77■□□□□ 0.12
SFSWAP-207ENST00000538548 WNT5BQ9H1J7 359 aa15.77■□□□□ 0.12
SFSWAP-207ENST00000538548 C1QTNF9BB2RNN3 333 aa15.77■□□□□ 0.11
SFSWAP-207ENST00000538548 C11orf94C9JXX5 98 aa15.77■□□□□ 0.11
SFSWAP-207ENST00000538548 FAM90A26D6RGX4 464 aa15.77■□□□□ 0.11
SFSWAP-207ENST00000538548 NPPCP23582 126 aa15.77■□□□□ 0.11
SFSWAP-207ENST00000538548 DMRTA1Q5VZB9 504 aa15.77■□□□□ 0.11
SFSWAP-207ENST00000538548 CPT1CQ8TCG5 803 aa15.77■□□□□ 0.11
SFSWAP-207ENST00000538548 DEFB126Q9BYW3 111 aa15.77■□□□□ 0.11
SFSWAP-207ENST00000538548 IL36RNQ9UBH0 155 aa15.77■□□□□ 0.11
SFSWAP-207ENST00000538548 TRBV6-6A0A0A6YYG2 114 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 HS3ST1O14792 307 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 SELEP16581 610 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 COX5AP20674 150 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 PLA2G5P39877 138 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 TDRG1Q3Y452 100 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 ZNF468Q5VIY5 522 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 ARL6IP6Q8N6S5 226 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 OR51B6Q9H340 312 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 PRO3102Q9H379 93 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 YPEL3P61236 119 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 C20orf204Q6ZNR8 217 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 SF3B5Q9BWJ5 86 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 ELOVL5Q9NYP7 299 aa15.76■□□□□ 0.11
SFSWAP-207ENST00000538548 ADMP35318 185 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 OR5I1Q13606 314 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 ATP6V1FQ16864 119 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 PCED1AQ9H1Q7 454 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 NCOR1O75376 2440 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 CELSR3Q9NYQ7 3312 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 ARHGAP21Q5T5U3 1957 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 CLDN1O95832 211 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 IGLV2-14P01704 120 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 ESDP10768 282 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 CD33P20138 364 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 CD82P27701 267 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 PCBD1P61457 104 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 SELENOTP62341 195 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 FFAR4Q5NUL3 377 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 ALKBH3Q96Q83 286 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 VAMP8Q9BV40 100 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 TMEM147Q9BVK8 224 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 LIN7CQ9NUP9 197 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 MTCH1Q9NZJ7 389 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 ASCC3Q8N3C0 2202 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 ZNF407Q9C0G0 2248 aa15.75■□□□□ 0.11
SFSWAP-207ENST00000538548 A0A0J9YW62 118 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 PDE6DO43924 150 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 CD27P26842 260 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 ZNF585BQ52M93 769 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 COL5A1-AS1Q5SY13 56 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 LRP11Q86VZ4 500 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 ZDHHC23Q8IYP9 409 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 SGMS2Q8NHU3 365 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 PHF7Q9BWX1 381 aaPredicted RBP15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 RYDENQ9NUL5 291 aaKnown RBP15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 PAM16Q9Y3D7 125 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 ADAMTS20P59510 1910 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 KIAA1549Q9HCM3 1950 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 LNP1A1A4G5 178 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 TRAPPC2LH3BP13 241 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 EPHA8P29322 1005 aaPredicted RBP15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 MPLP40238 635 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 FGFBP3Q8TAT2 258 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 FOXB1Q99853 325 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 C1QTNF5Q9BXJ0 243 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 SRXN1Q9BYN0 137 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 ZFP30Q9Y2G7 519 aa15.74■□□□□ 0.11
SFSWAP-207ENST00000538548 GPM6AP51674 278 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 DSCR4P56555 118 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 BATFQ16520 125 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 FGF23Q9GZV9 251 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 GRIFINA4D1Z8 144 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 NPIPB11E5RHQ5 1161 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 DEGS1O15121 323 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 ZIC3O60481 467 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 NTF4P34130 210 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 PMP22Q01453 160 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 NUFIP2Q7Z417 695 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 OR56B2PQ8NGI1 322 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 DTD1Q8TEA8 209 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms