RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RPL29P47914 159 aaKnown RBP14.52□□□□□ -0.08
SCARB1-205ENST00000538291 ZNF137PP52743 207 aa14.52□□□□□ -0.08
SCARB1-205ENST00000538291 KCNK17Q96T54 332 aa14.52□□□□□ -0.08
SCARB1-205ENST00000538291 EPOPA6NHQ4 379 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 H0Y980 276 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 APCSP02743 223 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 MAS1LP35410 378 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 RIPPLY2Q5TAB7 128 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 HCP5Q6MZN7 132 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 ZNF645Q8N7E2 425 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 OR4C12Q96R67 309 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 IL17BQ9UHF5 180 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 hCG_38984A0A1B0GV85 526 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 NPIPB6E9PJ23 425 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 FCARP24071 287 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 ATP6V0CP27449 155 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 ODAMA1E959 279 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 TMEM189A5PLL7 270 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 GZMMP51124 257 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 AMMECR1LQ6DCA0 310 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 ZNF880Q6PDB4 577 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 ZNF841Q6ZN19 808 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 CALYQ9NYX4 217 aa14.52□□□□□ -0.09
SCARB1-205ENST00000538291 FOXD3Q9UJU5 478 aaPredicted RBP14.52□□□□□ -0.09
SCARB1-205ENST00000538291 A0A1W2PQM1 296 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 TMEM218A2RU14 115 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 DLL1O00548 723 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 SYNGR3O43761 229 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 NAT2P11245 290 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 IER3P46695 156 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 IGSF11Q5DX21 431 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 FADS6Q8N9I5 356 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 RAX2Q96IS3 184 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 TMEM204Q9BSN7 226 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 PXMP4Q9Y6I8 212 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 SNURFLB1AK76 121 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 M0R3E3 92 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 LOC105371242A0A075B767 164 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 MPDU1O75352 247 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 CXCL3P19876 107 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 EIF4EBP2Q13542 120 aaPredicted RBP14.51□□□□□ -0.09
SCARB1-205ENST00000538291 VAX1Q5SQQ9 334 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 FAM216AQ8WUB2 273 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 SIRT7Q9NRC8 400 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 IGHV3OR16-12A0A075B7B8 117 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 UBE2L6O14933 153 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 CYB5R3P00387 301 aaPredicted RBP14.51□□□□□ -0.09
SCARB1-205ENST00000538291 LINC00869P0C866 280 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 COMPP49747 757 aaPredicted RBP14.51□□□□□ -0.09
SCARB1-205ENST00000538291 ARF6P62330 175 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 SERF2P84101 59 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 ATP1A1-AS1Q5TC04 95 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 OR8A1Q8NGG7 326 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 CCL19Q99731 98 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 GDF15Q99988 308 aa14.51□□□□□ -0.09
SCARB1-205ENST00000538291 IFI6P09912 130 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 NUBP1P53384 320 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 MFAP4P55083 255 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 LGALSLQ3ZCW2 172 aaPredicted RBP14.5□□□□□ -0.09
SCARB1-205ENST00000538291 OR52M1Q8NGK5 317 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 ZNF207O43670 478 aaKnown RBP14.5□□□□□ -0.09
SCARB1-205ENST00000538291 TWIST1Q15672 202 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 COX5BP10606 129 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 MMP9P14780 707 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 HOXA6P31267 233 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 CSRP2Q16527 193 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 C11orf91Q3C1V1 193 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 BPIFA4PQ86YQ2 179 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 ELOVL5Q9NYP7 299 aa14.5□□□□□ -0.09
SCARB1-205ENST00000538291 AP4M1O00189 453 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 FOXH1O75593 365 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 GCSHP23434 173 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 LY6EQ16553 131 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 WDFY1Q8IWB7 410 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 KLF14Q8TD94 323 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-205ENST00000538291 ADIPOR1Q96A54 375 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 ZNF343Q6P1L6 599 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 OR5AU1Q8NGC0 362 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 RBM38Q9H0Z9 239 aaKnown RBP14.49□□□□□ -0.09
SCARB1-205ENST00000538291 ZMAT5Q9UDW3 170 aaKnown RBP14.49□□□□□ -0.09
SCARB1-205ENST00000538291 SCTP09683 121 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 PCOLCEQ15113 449 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 DCTN5Q9BTE1 182 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 COL5A3P25940 1745 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-205ENST00000538291 CABIN1Q9Y6J0 2220 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 TRAV30A0A087WSZ9 112 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 FAM181BA6NEQ2 426 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 A8MWL6 223 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 B9A039 149 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 H3BQ15 152 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 ZNHIT1O43257 154 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 SLC25A17O43808 307 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 OVCH2Q7RTZ1 564 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 OR9G1Q8NH87 305 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 ALX4Q9H161 411 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-205ENST00000538291 PRDM6Q9NQX0 595 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 FUT9Q9Y231 359 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 KCNK7Q9Y2U2 307 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 IGHV1-69-2A0A0G2JMI3 117 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 SULT1A2P50226 295 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms