RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SSBP1Q04837 148 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 BTN1A1Q13410 526 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM249Q2WGJ8 235 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 PIGYQ3MUY2 71 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 C1orf100Q5SVJ3 147 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 STUMQ69YW2 141 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 CYB5R2Q6BCY4 276 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ELP2Q6IA86 826 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 C11orf88Q6PI97 169 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ALKAL2Q6UX46 152 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 OR2W3Q7Z3T1 314 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 LINC00596Q86U02 117 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM17Q86X19 198 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 OSR2Q8N2R0 312 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF561Q8N587 486 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 EIF4E3Q8N5X7 224 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FAM216BQ8N7L0 139 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 CHST4Q8NCG5 386 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 MAPK1IP1LQ8NDC0 245 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 PRSS3P2Q8NHM4 247 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 COQ8AQ8NI60 647 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 NEK7Q8TDX7 302 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 H1FXQ92522 213 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FAM3DQ96BQ1 224 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 SEH1LQ96EE3 360 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 C18orf12Q96KH6 178 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 CXorf58Q96LI9 332 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 CCL13Q99616 98 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 URM1Q9BTM9 101 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ABHD14AQ9BUJ0 271 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM59Q9BXS4 323 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 SELENOIQ9C0D9 397 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 SHARPINQ9H0F6 387 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ARL6Q9H0F7 186 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 BANF2Q9H503 90 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 PATZ1Q9HBE1 687 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 LPAR2Q9HBW0 351 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 HES4Q9HCC6 221 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 KAAG1Q9UBP8 84 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 SLC25A10Q9UBX3 287 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 OPN4Q9UHM6 478 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FLVCR2Q9UPI3 526 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ST3GAL6Q9Y274 331 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 PRELID3BQ9Y3B1 194 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 PRRC2AP48634 2157 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ASH1LQ9NR48 2969 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FLNBO75369 2602 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 POLQO75417 2590 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 LOC105371242A0A075B767 164 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 A0A096LNT2 108 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 A0A0D9SG52 128 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 A0A1W2PPH5 198 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 METTL21EPA6NDL7 271 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 DNAJC9-AS1A6NH13 148 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 CYSRT1A8MQ03 144 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 MPTX1A8MV57 137 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 F5H0A9 414 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-208ENST00000538266 F8VVB4 439 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 F8VWA3 439 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 SIRPB1O00241 398 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 SIGLEC5O15389 551 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 PHF1O43189 567 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-208ENST00000538266 XRCC3O43542 346 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 ENSAO43768 121 aaKnown RBP3.55□□□□□ -1.84
SNHG1-208ENST00000538266 RBBP9O75884 186 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 SCGNO76038 276 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 OR2H2O95918 312 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 TGFAP01135 160 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 RLN1P04808 185 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 MSMBP08118 114 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 WNT2P09544 360 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 AKAIN1P0CW23 69 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 IGHV4-31P0DP07 118 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 ANXA7P20073 488 aaKnown RBP3.55□□□□□ -1.84
SNHG1-208ENST00000538266 IL2RGP31785 369 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 CLDN12P56749 244 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 EDDM3BP56851 147 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 ACTBP60709 375 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 LMO4P61968 165 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 ACTG1P63261 375 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 LCN2P80188 198 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 SSBP2P81877 361 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-208ENST00000538266 FGL1Q08830 312 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 EDDM3AQ14507 147 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 IL13RA2Q14627 380 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF146Q15072 292 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 TAF9Q16594 264 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 MPV17LQ2QL34 196 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 ANXA2RQ3ZCQ2 193 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 PAN3Q58A45 887 aaKnown RBP3.55□□□□□ -1.84
SNHG1-208ENST00000538266 FAM166AQ6J272 317 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 LPCAT3Q6P1A2 487 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 LYPD2Q6UXB3 125 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 BTNL3Q6UXE8 466 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 ASCL4Q6XD76 172 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 RNF144BQ7Z419 303 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 C1QL2Q7Z5L3 287 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 TRAPPC6BQ86SZ2 158 aa3.55□□□□□ -1.84
SNHG1-208ENST00000538266 CIARTQ8N365 385 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-208ENST00000538266 STPG2Q8N412 459 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms