RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 LAMTOR2Q9Y2Q5 125 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 NEURL1O76050 574 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 BGLAPP02818 100 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 GPR3P46089 330 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 NPBWR2P48146 333 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 CXorf66Q5JRM2 361 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-213ENST00000537002 LYSMD4Q5XG99 296 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SSMEM1Q8WWF3 244 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 RAB9BQ9NP90 201 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 GPR27Q9NS67 375 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 CDIPTO14735 213 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SCRG1O75711 98 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 FOLR3P41439 243 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 ZNF137PP52743 207 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 WDFY1Q8IWB7 410 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 NHLRC2Q8NBF2 726 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 OR4P4Q8NGL7 312 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 DNASE2BQ8WZ79 361 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 GPR35Q9HC97 309 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SPANXA1Q9NS26 97 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 IGHV2-70DA0A0C4DH43 119 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 M0R296 226 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SH2D1BO14796 132 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 OR2J3O76001 311 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 CT45A10P0DMU9 189 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 TDGF1P13385 188 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 AESQ08117 197 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 FHL5Q5TD97 284 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 LRRC75AQ8NAA5 344 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 NAT6Q93015 286 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 TM2D1Q9BX74 207 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 C12orf49Q9H741 205 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 IGSF23A1L1A6 192 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A26D6RGX4 464 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 ATXN7O15265 892 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-213ENST00000537002 NGFRP08138 427 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 KIAA1644Q3SXP7 199 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-213ENST00000537002 IGHV3-43A0A0B4J1X8 118 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 IL18BPO95998 194 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 IGKV1D-16P01601 117 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SLC25A5P05141 298 aaKnown RBP4.67□□□□□ -1.66
PTPRD-213ENST00000537002 IGHV3-43DP0DP04 118 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 RHOBP62745 196 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SPRED2Q7Z698 418 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 LYPD6Q86Y78 171 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 OR8I2Q8N0Y5 310 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 D2HGDHQ8N465 521 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 NUDT11Q96G61 164 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 TBL2Q9Y4P3 447 aaKnown RBP4.67□□□□□ -1.66
PTPRD-213ENST00000537002 ETV2O00321 342 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-213ENST00000537002 TNFSF11O14788 317 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 GNG7O60262 68 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SSR4P51571 173 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 QRFPP83859 136 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 PSG5Q15238 335 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM249Q2WGJ8 235 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SAMD13Q5VXD3 122 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 YRDCQ86U90 279 aaKnown RBP4.67□□□□□ -1.66
PTPRD-213ENST00000537002 OR10G3Q8NGC4 313 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 OR8A1Q8NGG7 326 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 FAM216AQ8WUB2 273 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 MRGPRFQ96AM1 343 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 CTHRC1Q96CG8 243 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 WDYHV1Q96HA8 205 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 ALKBH3Q96Q83 286 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-213ENST00000537002 SEMA5BQ9P283 1151 aa4.67□□□□□ -1.66
PTPRD-213ENST00000537002 A0A1W2PPV9 198 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A10PA6NDY2 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A18PA6NE21 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A16PA6NEW6 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A20PA6NIJ5 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A8PA6NJQ4 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A7PA6NKC0 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A22PA8MWA6 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A12PA8MX19 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A5PA8MXJ8 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A23PA8MXZ1 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 GDF9O60383 454 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 POU2F2P09086 479 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 NPSP0C0P6 89 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A15PP0C7V4 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A13PP0C7W8 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A14PP0C7W9 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A24PP0C7X0 464 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 CLDN15P56746 228 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 OR52L2PQ8NGH6 319 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 OR1F12Q8NHA8 337 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 BLNKQ8WV28 456 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 C8orf44Q96CB5 159 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 COX14Q96I36 57 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 HEATR5AQ86XA9 2040 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 IGHV2OR16-5A0A0B4J2B6 119 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 PATE4P0C8F1 98 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 CA6P23280 308 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 SRIP30626 198 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 G6PCP35575 357 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 SLC25A34Q6PIV7 304 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 CPEB3Q8NE35 698 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms