RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 RAB5BP61020 215 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 RNF212Q495C1 297 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 C2CD4CQ8TF44 421 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 LRRC29Q8WV35 223 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 ATP5SQ99766 215 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 LRFN3Q9BTN0 628 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 ABHD14AQ9BUJ0 271 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 OOEPA6NGQ2 149 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 HBZP02008 142 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 MT-ND4LP03901 98 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 RPL35P42766 123 aaKnown RBP11.2□□□□□ -0.62
VPS33B-202ENST00000535906 GLIPR1P48060 266 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 RHEBQ15382 184 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 SMIM21Q3B7S5 101 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 ZFP82Q8N141 532 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 OR52L2PQ8NGH6 319 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 MRGPRDQ8TDS7 321 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 RNF150Q9ULK6 438 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 ACACAQ13085 2346 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 IGKV1-5P01602 117 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 PTAFRP25105 342 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 IL2RGP31785 369 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 CCL20P78556 96 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 HABP2Q14520 560 aaPredicted RBP11.2□□□□□ -0.62
VPS33B-202ENST00000535906 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 C22orf34Q6ZV56 151 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 ASCL5Q7RTU5 278 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 STX12Q86Y82 276 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 ZNF295-AS1Q8N0V1 137 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 CD177Q8N6Q3 437 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 RARRES2Q99969 163 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 C20orf24Q9BUV8 137 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 APC2O95996 2303 aa11.2□□□□□ -0.62
VPS33B-202ENST00000535906 RBFOX3A6NFN3 312 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 IFNL4K9M1U5 179 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 TXNL1O43396 289 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 OR13C7P0DN81 318 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 EGR1P18146 543 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 RPL23AP62750 156 aaKnown RBP11.19□□□□□ -0.62
VPS33B-202ENST00000535906 EIF2S3LQ2VIR3 472 aaKnown RBP11.19□□□□□ -0.62
VPS33B-202ENST00000535906 KRBOX4Q5JUW0 171 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 SP5Q6BEB4 398 aaPredicted RBP11.19□□□□□ -0.62
VPS33B-202ENST00000535906 IQCF2Q8IXL9 164 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 RNASE11Q8TAA1 199 aaKnown RBP11.19□□□□□ -0.62
VPS33B-202ENST00000535906 CD300LFQ8TDQ1 290 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 LSM10Q969L4 123 aaKnown RBP11.19□□□□□ -0.62
VPS33B-202ENST00000535906 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 LIN7CQ9NUP9 197 aaKnown RBP11.19□□□□□ -0.62
VPS33B-202ENST00000535906 KIAA1456Q9P272 454 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 CACNG5Q9UF02 275 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 PIEZO2Q9H5I5 2752 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 DFFBO76075 338 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 CRYAAP02489 173 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 CEACAM8P31997 349 aaPredicted RBP11.19□□□□□ -0.62
VPS33B-202ENST00000535906 SSTR5P35346 364 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 SULT1A1P50225 295 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 RUNX1Q01196 453 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 FAM27E3Q08E93 113 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 KRTCAP3Q53RY4 240 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 SOHLH1Q5JUK2 328 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 VHLLQ6RSH7 139 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 OR13A1Q8NGR1 328 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 FAM57AQ8TBR7 257 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 MUCL1Q96DR8 90 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 ABHD17AQ96GS6 310 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 C5orf30Q96GV9 206 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 OR2D2Q9H210 308 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 HIPK2Q9H2X6 1198 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 ICE1Q9Y2F5 2266 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 SMG1Q96Q15 3661 aaKnown RBP11.19□□□□□ -0.62
VPS33B-202ENST00000535906 USF3Q68DE3 2245 aa11.19□□□□□ -0.62
VPS33B-202ENST00000535906 ZNF98A6NK75 572 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 C1orf196B1AJZ1 125 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 H3BP45 60 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 IGHV3-13P01766 116 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 IFNA4P05014 189 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 CD200P41217 278 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 TAS2R30P59541 319 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 NKX6-1P78426 367 aaPredicted RBP11.18□□□□□ -0.62
VPS33B-202ENST00000535906 AKR1C8PQ5T2L2 129 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 DPPA3Q6W0C5 159 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 SFXN3Q9BWM7 321 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 WSB1Q9Y6I7 421 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 SRRM5B3KS81 715 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 MKRN2OSH3BPM6 223 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 DAOP14920 347 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 BMP5P22003 454 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 PRDX2P32119 198 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 GLRXP35754 106 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 FAM180AQ6UWF9 173 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 RFESDQ8TAC1 157 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 SFT2D1Q8WV19 159 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 ISOC2Q96AB3 205 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 DCTN5Q9BTE1 182 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 UNKLQ9H9P5 680 aaKnown RBP11.18□□□□□ -0.62
VPS33B-202ENST00000535906 COA4Q9NYJ1 87 aa11.18□□□□□ -0.62
VPS33B-202ENST00000535906 IGKV1D-17A0A075B6S4 117 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 RAMP3O60896 148 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms