RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 Q5BKY6 102 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 C6orf52Q5T4I8 152 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 EBLN2Q6P2I7 272 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 CENPQQ7L2Z9 268 aaPredicted RBP-0.64□□□□□ -2.51
COPB1-212ENST00000534771 SSX9Q7RTT3 188 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 ZBTB8OSQ8IWT0 167 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 CA13Q8N1Q1 262 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 C8orf31Q8N9H6 132 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 C9orf163Q8N9P6 203 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 GATD1Q8NB37 220 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 OR51Q1Q8NH59 317 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 CLDND2Q8NHS1 167 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 FAM81AQ8TBF8 368 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 SMCR5Q8TEV8 140 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 BORCS5Q969J3 196 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 MED18Q9BUE0 208 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 NUP58Q9BVL2 599 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 EBPLQ9BY08 206 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 NXF2Q9GZY0 626 aaKnown RBP-0.64□□□□□ -2.51
COPB1-212ENST00000534771 DNAJC27Q9NZQ0 273 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 KLK9Q9UKQ9 250 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 HHLA2Q9UM44 414 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 DSPP15924 2871 aaKnown RBP-0.64□□□□□ -2.51
COPB1-212ENST00000534771 DNMT1P26358 1616 aaKnown RBP-0.64□□□□□ -2.51
COPB1-212ENST00000534771 UNC79Q9P2D8 2635 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 NBEAL1Q6ZS30 2694 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 USP9YO00507 2555 aaPredicted RBP-0.65□□□□□ -2.51
COPB1-212ENST00000534771 NINLQ9Y2I6 1382 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 FAM183AA6NL82 134 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TEX46H3BTG2 121 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 M0R2N4 97 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 UBE2L6O14933 153 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 PDCD6O75340 191 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 WBP4O75554 376 aaKnown RBP-0.65□□□□□ -2.51
COPB1-212ENST00000534771 NPYP01303 97 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TRGC1P0CF51 173 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 CRYBB3P26998 211 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 PYCR1P32322 319 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 CRATP43155 626 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 ETV1P50549 477 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 MP68P56378 58 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TAS2R30P59541 319 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TAS2R60P59551 318 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TPI1P60174 286 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 HIST1H4AP62805 103 aaKnown RBP-0.65□□□□□ -2.51
COPB1-212ENST00000534771 RAD51Q06609 339 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TAL2Q16559 108 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 KRTAP19-8Q3LI54 63 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 C10orf99Q6UWK7 81 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 DRAM2Q6UX65 266 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 LINC00575Q6W349 94 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 ZNF705AQ6ZN79 300 aaPredicted RBP-0.65□□□□□ -2.51
COPB1-212ENST00000534771 FAM122BQ7Z309 247 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 LUZP2Q86TE4 346 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 GAPTQ8N292 157 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 C17orf78Q8N4C9 275 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 INO80EQ8NBZ0 244 aaPredicted RBP-0.65□□□□□ -2.51
COPB1-212ENST00000534771 OR51A7Q8NH64 312 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 SGMS2Q8NHU3 365 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 ZNF418Q8TF45 676 aaPredicted RBP-0.65□□□□□ -2.51
COPB1-212ENST00000534771 NELFBQ8WX92 580 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 OR8D1Q8WZ84 308 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 ISOC2Q96AB3 205 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TMA16Q96EY4 203 aaKnown RBP-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TSPAN32Q96QS1 320 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 CHP1Q99653 195 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 SUCNR1Q9BXA5 334 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 EIF5A2Q9GZV4 153 aaKnown RBP-0.65□□□□□ -2.51
COPB1-212ENST00000534771 HAUS4Q9H6D7 363 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 SLC2A9Q9NRM0 540 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 TAAR3PQ9P1P4 343 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 LHFPL6Q9Y693 200 aa-0.65□□□□□ -2.51
COPB1-212ENST00000534771 MCM3APO60318 1980 aa-0.66□□□□□ -2.51
COPB1-212ENST00000534771 LINC00854A0A1B0GVQ3 168 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 OR51F1A6NGY5 319 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 H3BSA7 217 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 H7C2G1 150 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 I3L4J1 428 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 SDCBPO00560 298 aaPredicted RBP-0.66□□□□□ -2.52
COPB1-212ENST00000534771 CXCL11O14625 94 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 GATCO43716 136 aaKnown RBP-0.66□□□□□ -2.52
COPB1-212ENST00000534771 SYNGR1O43759 233 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 PSMG1O95456 288 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 UBBP0CG47 229 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 GSTM3P21266 225 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 CPN2P22792 545 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 OPRM1P35372 400 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 CCR2P41597 374 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 ACTR1BP42025 376 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 HNMTP50135 292 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 STC1P52823 247 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 CLDN18P56856 261 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 TAS2R45P59539 299 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 FGF12P61328 243 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 RPL31P62899 125 aaKnown RBP-0.66□□□□□ -2.52
COPB1-212ENST00000534771 HBG1P69891 147 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 HBG2P69892 147 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 SLC35B1P78383 322 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 SPAG1Q07617 926 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 TMEM31Q5JXX7 168 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms