RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 BIKQ13323 160 aa2.58□□□□□ -2
USP48-215ENST00000534705 JOSD1Q15040 202 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 OR8G1Q15617 311 aa2.58□□□□□ -2
USP48-215ENST00000534705 ZNHIT3Q15649 155 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 UBE2V2Q15819 145 aa2.58□□□□□ -2
USP48-215ENST00000534705 ZNF630Q2M218 657 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 COA6Q5JTJ3 125 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 UTF1Q5T230 341 aa2.58□□□□□ -2
USP48-215ENST00000534705 GPR157Q5UAW9 335 aa2.58□□□□□ -2
USP48-215ENST00000534705 C9orf135Q5VTT2 229 aa2.58□□□□□ -2
USP48-215ENST00000534705 SLC22A10Q63ZE4 541 aa2.58□□□□□ -2
USP48-215ENST00000534705 LEMD1Q68G75 181 aa2.58□□□□□ -2
USP48-215ENST00000534705 ULK3Q6PHR2 472 aa2.58□□□□□ -2
USP48-215ENST00000534705 SCIMPQ6UWF3 145 aa2.58□□□□□ -2
USP48-215ENST00000534705 BTNL3Q6UXE8 466 aa2.58□□□□□ -2
USP48-215ENST00000534705 IL34Q6ZMJ4 242 aa2.58□□□□□ -2
USP48-215ENST00000534705 SHISA6Q6ZSJ9 500 aa2.58□□□□□ -2
USP48-215ENST00000534705 BHLHA15Q7RTS1 189 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 SLC36A1Q7Z2H8 476 aa2.58□□□□□ -2
USP48-215ENST00000534705 OR2W3Q7Z3T1 314 aa2.58□□□□□ -2
USP48-215ENST00000534705 RBM45Q8IUH3 476 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 CSNK1A1LQ8N752 337 aa2.58□□□□□ -2
USP48-215ENST00000534705 HSD17B11Q8NBQ5 300 aa2.58□□□□□ -2
USP48-215ENST00000534705 SDR9C7Q8NEX9 313 aa2.58□□□□□ -2
USP48-215ENST00000534705 B3GNT7Q8NFL0 401 aa2.58□□□□□ -2
USP48-215ENST00000534705 FDCSPQ8NFU4 85 aa2.58□□□□□ -2
USP48-215ENST00000534705 OR4F15Q8NGB8 312 aa2.58□□□□□ -2
USP48-215ENST00000534705 OR9G4Q8NGQ1 327 aa2.58□□□□□ -2
USP48-215ENST00000534705 OR10K1Q8NGX5 313 aa2.58□□□□□ -2
USP48-215ENST00000534705 OR52P1PQ8NH57 321 aa2.58□□□□□ -2
USP48-215ENST00000534705 COQ8AQ8NI60 647 aa2.58□□□□□ -2
USP48-215ENST00000534705 NT5CQ8TCD5 201 aa2.58□□□□□ -2
USP48-215ENST00000534705 THEM6Q8WUY1 208 aa2.58□□□□□ -2
USP48-215ENST00000534705 TWIST2Q8WVJ9 160 aa2.58□□□□□ -2
USP48-215ENST00000534705 MAFIPQ8WZ33 124 aa2.58□□□□□ -2
USP48-215ENST00000534705 PSMF1Q92530 271 aa2.58□□□□□ -2
USP48-215ENST00000534705 TIMD4Q96H15 378 aa2.58□□□□□ -2
USP48-215ENST00000534705 IMMP1LQ96LU5 166 aa2.58□□□□□ -2
USP48-215ENST00000534705 KCTD7Q96MP8 289 aa2.58□□□□□ -2
USP48-215ENST00000534705 MAPKAP1Q9BPZ7 522 aa2.58□□□□□ -2
USP48-215ENST00000534705 NRIP2Q9BQI9 281 aa2.58□□□□□ -2
USP48-215ENST00000534705 ZNF649Q9BS31 505 aa2.58□□□□□ -2
USP48-215ENST00000534705 SNHG12Q9BXW3 62 aa2.58□□□□□ -2
USP48-215ENST00000534705 ACTR3CQ9C0K3 210 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 PCBD2Q9H0N5 130 aa2.58□□□□□ -2
USP48-215ENST00000534705 HDHD2Q9H0R4 259 aa2.58□□□□□ -2
USP48-215ENST00000534705 ABCG5Q9H222 651 aa2.58□□□□□ -2
USP48-215ENST00000534705 IKZF5Q9H5V7 419 aa2.58□□□□□ -2
USP48-215ENST00000534705 METTL17Q9H7H0 456 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 METTL8Q9H825 291 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 FGF20Q9NP95 211 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 NRN1Q9NPD7 142 aa2.58□□□□□ -2
USP48-215ENST00000534705 TUBG2Q9NRH3 451 aa2.58□□□□□ -2
USP48-215ENST00000534705 TNFRSF19Q9NS68 423 aa2.58□□□□□ -2
USP48-215ENST00000534705 C1orf109Q9NX04 203 aa2.58□□□□□ -2
USP48-215ENST00000534705 TAS2R5Q9NYW4 299 aa2.58□□□□□ -2
USP48-215ENST00000534705 IL36GQ9NZH8 169 aa2.58□□□□□ -2
USP48-215ENST00000534705 CALML5Q9NZT1 146 aa2.58□□□□□ -2
USP48-215ENST00000534705 RPS6KB2Q9UBS0 482 aa2.58□□□□□ -2
USP48-215ENST00000534705 CLN8Q9UBY8 286 aa2.58□□□□□ -2
USP48-215ENST00000534705 CLEC2DQ9UHP7 191 aa2.58□□□□□ -2
USP48-215ENST00000534705 ZNF225Q9UK10 706 aa2.58□□□□□ -2
USP48-215ENST00000534705 ZNF222Q9UK12 451 aa2.58□□□□□ -2
USP48-215ENST00000534705 PUS1Q9Y606 427 aaKnown RBP eCLIP2.58□□□□□ -2
USP48-215ENST00000534705 HECTD1Q9ULT8 2610 aa2.58□□□□□ -2
USP48-215ENST00000534705 RAI1Q7Z5J4 1906 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 FLNBO75369 2602 aaKnown RBP2.57□□□□□ -2
USP48-215ENST00000534705 APCP25054 2843 aa2.57□□□□□ -2
USP48-215ENST00000534705 LRBAP50851 2863 aa2.57□□□□□ -2
USP48-215ENST00000534705 ADGRG4Q8IZF6 3080 aa2.57□□□□□ -2
USP48-215ENST00000534705 IGKV3D-11A0A0A0MRZ8 115 aa2.57□□□□□ -2
USP48-215ENST00000534705 TRBV6-7A0A0A0MS04 114 aa2.57□□□□□ -2
USP48-215ENST00000534705 IGHV1-45A0A0A0MS14 117 aa2.57□□□□□ -2
USP48-215ENST00000534705 TRAV14DV4A0A0A6YYC5 116 aa2.57□□□□□ -2
USP48-215ENST00000534705 A0A0D9SG52 128 aa2.57□□□□□ -2
USP48-215ENST00000534705 KIR2DL5BA0A0G2JN68 375 aa2.57□□□□□ -2
USP48-215ENST00000534705 KIR2DL5BA0A0G2JPC4 375 aa2.57□□□□□ -2
USP48-215ENST00000534705 A0A1B0GTI1 187 aa2.57□□□□□ -2
USP48-215ENST00000534705 TMEM72A0PK05 275 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR5H15A6NDH6 313 aa2.57□□□□□ -2
USP48-215ENST00000534705 ZNF860A6NHJ4 632 aa2.57□□□□□ -2
USP48-215ENST00000534705 A6NIZ1 184 aa2.57□□□□□ -2
USP48-215ENST00000534705 C9J4A7 227 aa2.57□□□□□ -2
USP48-215ENST00000534705 TSTD3H0UI37 97 aa2.57□□□□□ -2
USP48-215ENST00000534705 MFNGO00587 321 aa2.57□□□□□ -2
USP48-215ENST00000534705 RFXANKO14593 260 aa2.57□□□□□ -2
USP48-215ENST00000534705 GGCTO75223 188 aaKnown RBP2.57□□□□□ -2
USP48-215ENST00000534705 STK16O75716 305 aa2.57□□□□□ -2
USP48-215ENST00000534705 KBTBD11O94819 623 aa2.57□□□□□ -2
USP48-215ENST00000534705 UBL3O95164 117 aa2.57□□□□□ -2
USP48-215ENST00000534705 AHSA1O95433 338 aa2.57□□□□□ -2
USP48-215ENST00000534705 SIX6O95475 246 aa2.57□□□□□ -2
USP48-215ENST00000534705 IGF2P01344 180 aa2.57□□□□□ -2
USP48-215ENST00000534705 CD74P04233 296 aa2.57□□□□□ -2
USP48-215ENST00000534705 ALDOBP05062 364 aa2.57□□□□□ -2
USP48-215ENST00000534705 FCGR3AP08637 254 aa2.57□□□□□ -2
USP48-215ENST00000534705 CTXN2P0C2S0 81 aa2.57□□□□□ -2
USP48-215ENST00000534705 GPX2P18283 190 aa2.57□□□□□ -2
USP48-215ENST00000534705 SDC1P18827 310 aa2.57□□□□□ -2
USP48-215ENST00000534705 ELK1P19419 428 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms