RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 HLA-DRB3P79483 266 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 LINC00696Q6ZRV3 163 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 OR10A7Q8NGE5 316 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 TECTBQ96PL2 329 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 HSPB1P04792 205 aaKnown RBP16.42■□□□□ 0.22
CAPN1-226ENST00000533820 MAGEA5P43359 124 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 ZFP36L1Q07352 338 aaKnown RBP16.42■□□□□ 0.22
CAPN1-226ENST00000533820 BAXQ07812 192 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 IL24Q13007 206 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 OR8G2PQ6IF36 304 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 HLA-CQ95604 372 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 CEBPZOSA8MTT3 80 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 FAM53AQ6NSI3 398 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-226ENST00000533820 TMEM105Q8N8V8 129 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 CT55Q8WUE5 264 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 MAP1BP46821 2468 aaKnown RBP16.41■□□□□ 0.22
CAPN1-226ENST00000533820 IGKV1-39P01597 117 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 IGKV1D-39P04432 117 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 CD82P27701 267 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 FBXW9Q5XUX1 488 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 APOBEC3DQ96AK3 386 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-226ENST00000533820 PSENENQ9NZ42 101 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 RNF150Q9ULK6 438 aa16.41■□□□□ 0.22
CAPN1-226ENST00000533820 DFFBO76075 338 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 S100GP29377 79 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 ERVFC1-1P60608 527 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 ZXDAP98168 799 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 ZNF324BQ6AW86 544 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-226ENST00000533820 C11orf42Q8N5U0 333 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 NECAP1Q8NC96 275 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 DLL3Q9NYJ7 618 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 SVILO95425 2214 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 TMEM210A6NLX4 147 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 NTN3O00634 580 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-226ENST00000533820 CYC1P08574 325 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 GLIPR1P48060 266 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 ZNF726P1Q15940 193 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 FAM58AQ8N1B3 248 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 WFIKKN1Q96NZ8 548 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 SMDT1Q9H4I9 107 aa16.4■□□□□ 0.22
CAPN1-226ENST00000533820 LOC102723971A0A1B0GUV8 181 aa16.39■□□□□ 0.22
CAPN1-226ENST00000533820 TNRC18O15417 2968 aaPredicted RBP16.39■□□□□ 0.22
CAPN1-226ENST00000533820 RBMXL1Q96E39 390 aaKnown RBP16.39■□□□□ 0.22
CAPN1-226ENST00000533820 FOXJ2Q9P0K8 574 aa16.39■□□□□ 0.22
CAPN1-226ENST00000533820 ANKRD30BLA7E2S9 258 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 DEGS1O15121 323 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 HBE1P02100 147 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 GAL3ST2Q9H3Q3 398 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 RPH3ALQ9UNE2 315 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 SYNGR2O43760 224 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A2PQ658T7 463 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 OR10V1Q8NGI7 309 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 FAM210BQ96KR6 192 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 ACTR3CQ9C0K3 210 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-226ENST00000533820 TRAPPC2LQ9UL33 140 aa16.39■□□□□ 0.21
CAPN1-226ENST00000533820 UBE2L5PA0A1B0GUS4 154 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 TUBG1P23258 451 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 DCAF12Q5T6F0 453 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 NUFIP2Q7Z417 695 aaKnown RBP16.38■□□□□ 0.21
CAPN1-226ENST00000533820 HAPLN4Q86UW8 402 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 ITGB1BP1O14713 200 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 IGKV1-5P01602 117 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 CTXN2P0C2S0 81 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 PLP2Q04941 152 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 WDR25Q64LD2 544 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-226ENST00000533820 SNIP1Q8TAD8 396 aaKnown RBP16.38■□□□□ 0.21
CAPN1-226ENST00000533820 APH1AQ96BI3 265 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 RCC1LQ96I51 464 aaKnown RBP16.38■□□□□ 0.21
CAPN1-226ENST00000533820 PRSS50Q9UI38 385 aa16.38■□□□□ 0.21
CAPN1-226ENST00000533820 A0A1W2PPQ1 181 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 CLEC18AA5D8T8 446 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A10PA6NDY2 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A18PA6NE21 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A16PA6NEW6 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A20PA6NIJ5 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A8PA6NJQ4 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A7PA6NKC0 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A22PA8MWA6 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A12PA8MX19 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A5PA8MXJ8 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A23PA8MXZ1 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 SYNGR4O95473 234 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A15PP0C7V4 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A13PP0C7W8 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A14PP0C7W9 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 FAM90A24PP0C7X0 464 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 RAC2P15153 192 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 CEBPDP49716 269 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-226ENST00000533820 ZNF573Q86YE8 665 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 CLEC18CQ8NCF0 446 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 BOKQ9UMX3 212 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-226ENST00000533820 PPIAL4AQ9Y536 164 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 KIAA1324LA8MWY0 1029 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-226ENST00000533820 AQP7O14520 342 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 SCGB1D1O95968 90 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 BCL2P10415 239 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 WNT5AP41221 380 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 LHX2P50458 406 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 TESK1Q15569 626 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 Q6ZS49 121 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms