RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 RAB7AP51149 207 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 LGALS4P56470 323 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 BPIFB3P59826 476 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 IFITM3Q01628 133 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 LHFPL4Q7Z7J7 247 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 ODF3L1Q8IXM7 274 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 ARRDC1Q8N5I2 433 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 OR51S1Q8NGJ8 323 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 DEDD2Q8WXF8 326 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 ABHD14BQ96IU4 210 aa9.66□□□□□ -0.86
COMMD9-208ENST00000533643 TBL2Q9Y4P3 447 aaKnown RBP9.66□□□□□ -0.86
COMMD9-208ENST00000533643 HIVEP2P31629 2446 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 OR5H14A6NHG9 310 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 HNF1AP20823 631 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 EPHA1P21709 976 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 HTR1DP28221 377 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 FAUP35544 74 aaKnown RBP9.65□□□□□ -0.86
COMMD9-208ENST00000533643 SRP14P37108 136 aaKnown RBP9.65□□□□□ -0.86
COMMD9-208ENST00000533643 LUMP51884 338 aaPredicted RBP9.65□□□□□ -0.86
COMMD9-208ENST00000533643 ZNF137PP52743 207 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 FXYD4P59646 89 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 HERV-K104P61576 105 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 MINOS1Q5TGZ0 78 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 AADACL3Q5VUY0 350 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 LHFPL1Q86WI0 220 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 TMEM17Q86X19 198 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 BCL6BQ8N143 479 aaPredicted RBP9.65□□□□□ -0.86
COMMD9-208ENST00000533643 LYG1Q8N1E2 194 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 DYNAPQ8N1N2 210 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 TERB2Q8NHR7 220 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 FAM216AQ8WUB2 273 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 ST6GALNAC6Q969X2 333 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 MOB3AQ96BX8 217 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 FXYD6Q9H0Q3 95 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 MCUBQ9NWR8 336 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 DPM3Q9P2X0 92 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 AMMECR1Q9Y4X0 333 aaPredicted RBP9.65□□□□□ -0.86
COMMD9-208ENST00000533643 MINOS1-NBL1R4GNA1 71 aa9.65□□□□□ -0.86
COMMD9-208ENST00000533643 NSD1Q96L73 2696 aaPredicted RBP9.64□□□□□ -0.87
COMMD9-208ENST00000533643 SAA2-SAA4A0A096LPE2 208 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 A0A0U1RQK1 487 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 LEUTXA8MZ59 168 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 INAFM1C9JVW0 142 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 PROP1O75360 226 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 SAA2P0DJI9 122 aaPredicted RBP9.64□□□□□ -0.87
COMMD9-208ENST00000533643 PAX6P26367 422 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 GPR12P47775 334 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 DIAPH2-AS1Q14236 149 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 SCGB2B2Q4G0G5 96 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 TPTE2P1Q5T6R2 138 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 ZNF833PQ6ZTB9 187 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 C9orf139Q6ZV77 190 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 SECTM1Q8WVN6 248 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 BORCS5Q969J3 196 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 TOMM40LQ969M1 308 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 CREB3L1Q96BA8 519 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 MALSU1Q96EH3 234 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 C5orf30Q96GV9 206 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 ZNF251Q9BRH9 671 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 C7orf50Q9BRJ6 194 aaKnown RBP9.64□□□□□ -0.87
COMMD9-208ENST00000533643 BEX2Q9BXY8 128 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 SLC5A7Q9GZV3 580 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 MS4A7Q9GZW8 240 aaPredicted RBP9.64□□□□□ -0.87
COMMD9-208ENST00000533643 OR2D2Q9H210 308 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 GHITMQ9H3K2 345 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 SLC2A8Q9NY64 477 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 ZNF221Q9UK13 617 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 CDC42EP3Q9UKI2 254 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 TBC1D24Q9ULP9 559 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 GAB2Q9UQC2 676 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 RBM7Q9Y580 266 aaKnown RBP9.64□□□□□ -0.87
COMMD9-208ENST00000533643 MTORP42345 2549 aa9.64□□□□□ -0.87
COMMD9-208ENST00000533643 NAP1L6A6NFF2 107 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 RAB29O14966 203 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 IGLV2-14P01704 120 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 IL3RAP26951 378 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 CEACAM3P40198 252 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 UCP3P55916 312 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 SSX2Q16385 188 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 RPL39P5Q59GN2 51 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 IDO2Q6ZQW0 420 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 DRAM1Q8N682 238 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.63□□□□□ -0.87
COMMD9-208ENST00000533643 OR13C8Q8NGS7 320 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 C22orf15Q8WYQ4 148 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 S1PR3Q99500 378 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 PRRT1Q99946 306 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 CCL28Q9NRJ3 127 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 SDHAF2Q9NX18 166 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 PIPOXQ9P0Z9 390 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 SCP2D1Q9UJQ7 156 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 HILPDAQ9Y5L2 63 aa9.63□□□□□ -0.87
COMMD9-208ENST00000533643 CENPXA8MT69 81 aa9.62□□□□□ -0.87
COMMD9-208ENST00000533643 OOSP1A8MZH6 123 aa9.62□□□□□ -0.87
COMMD9-208ENST00000533643 HSD17B6O14756 317 aa9.62□□□□□ -0.87
COMMD9-208ENST00000533643 LYRM1O43325 122 aa9.62□□□□□ -0.87
COMMD9-208ENST00000533643 SLC22A5O76082 557 aa9.62□□□□□ -0.87
COMMD9-208ENST00000533643 GAPDHP04406 335 aaKnown RBP9.62□□□□□ -0.87
COMMD9-208ENST00000533643 GNRHRP30968 328 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms