RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 VWFP04275 2813 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 A0A1W2PPI3 338 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 FAM90A9PA6NNJ1 464 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 C12orf77C9JDV5 145 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 LPLP06858 475 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 GNG2P59768 71 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 AP3S2P59780 193 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 ZNF79Q15937 498 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 MOGAT2Q3SYC2 334 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 PLAC9Q5JTB6 97 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 NKAPLQ5M9Q1 402 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 SIGIRRQ6IA17 410 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 ZNF554Q86TJ5 538 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 ARHGAP5-AS1Q96IT6 56 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 ABHD1Q96SE0 405 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 OCSTAMPQ9BR26 566 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 WNT10AQ9GZT5 417 aa13.31□□□□□ -0.28
PKP3-209ENST00000533069 HSD17B6O14756 317 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 FBXO24O75426 580 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 TSPAN15O95858 294 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 CD3GP09693 182 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 GSTT2BP0CG30 244 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 DTYMKP23919 212 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 IL3RAP26951 378 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 LOXL3P58215 753 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 ZNF816Q0VGE8 651 aaPredicted RBP13.3□□□□□ -0.28
PKP3-209ENST00000533069 ARFRP1Q13795 201 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 SRSF7Q16629 238 aaKnown RBP eCLIP13.3□□□□□ -0.28
PKP3-209ENST00000533069 TRIQKQ629K1 86 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 SNX29P2Q8IUI4 249 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 OR4K15Q8NH41 348 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 OR56B4Q8NH76 319 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 WIPF2Q8TF74 440 aaPredicted RBP13.3□□□□□ -0.28
PKP3-209ENST00000533069 C12orf4Q9NQ89 552 aa13.3□□□□□ -0.28
PKP3-209ENST00000533069 UBE2QL1A1L167 161 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 RBBP9O75884 186 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 GAPDHP04406 335 aaKnown RBP13.29□□□□□ -0.28
PKP3-209ENST00000533069 GNB3P16520 340 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 INPP1P49441 399 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 Q6ZS46 218 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 MOB1BQ7L9L4 216 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 C6orf201Q7Z4U5 140 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 DRAM1Q8N682 238 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 C11orf44Q8N8P7 122 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 UBALD1Q8TB05 177 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 GPX8Q8TED1 209 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 CMSS1Q9BQ75 279 aaKnown RBP13.29□□□□□ -0.28
PKP3-209ENST00000533069 MBNL3Q9NUK0 354 aaKnown RBP13.29□□□□□ -0.28
PKP3-209ENST00000533069 KCNIP1Q9NZI2 227 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 GNG12Q9UBI6 72 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 MOB4Q9Y3A3 225 aa13.29□□□□□ -0.28
PKP3-209ENST00000533069 TRBV6-6A0A0A6YYG2 114 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 A0A1W2PPE3 182 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 TMEM235A6NFC5 223 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 HBZP02008 142 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 SNRNP70P08621 437 aaKnown RBP13.28□□□□□ -0.28
PKP3-209ENST00000533069 RCC1P18754 421 aaPredicted RBP13.28□□□□□ -0.28
PKP3-209ENST00000533069 TBPP20226 339 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 DCTN2Q13561 401 aaKnown RBP13.28□□□□□ -0.28
PKP3-209ENST00000533069 ABCA11PQ4W5N1 156 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 IZUMO1Q8IYV9 350 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 MRPL30Q8TCC3 161 aaKnown RBP13.28□□□□□ -0.28
PKP3-209ENST00000533069 THAP7Q9BT49 309 aaPredicted RBP13.28□□□□□ -0.28
PKP3-209ENST00000533069 TAF9BQ9HBM6 251 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 MTFP1Q9UDX5 166 aa13.28□□□□□ -0.28
PKP3-209ENST00000533069 RBMX2Q9Y388 322 aaKnown RBP13.28□□□□□ -0.28
PKP3-209ENST00000533069 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 TXNL1O43396 289 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 UPK1BO75841 260 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 TMEM11P17152 192 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 RCVRNP35243 200 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 DIAPH2-AS1Q14236 149 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 HES1Q14469 280 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 TMEM95Q3KNT9 176 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 FBLN7Q53RD9 439 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 STEAP3Q658P3 488 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 Q6ZS49 121 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 SLC25A48Q6ZT89 311 aaKnown RBP13.27□□□□□ -0.29
PKP3-209ENST00000533069 NDUFA11Q86Y39 141 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 PRR18Q8N4B5 295 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 ZNF439Q8NDP4 499 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 OR1L1Q8NH94 360 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 FAM110DQ8TAY7 271 aaPredicted RBP13.27□□□□□ -0.29
PKP3-209ENST00000533069 SULT4A1Q9BR01 284 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 C7orf50Q9BRJ6 194 aaKnown RBP13.27□□□□□ -0.29
PKP3-209ENST00000533069 FAAP24Q9BTP7 215 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 IFT46Q9NQC8 304 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 KCNK7Q9Y2U2 307 aa13.27□□□□□ -0.29
PKP3-209ENST00000533069 IGHV1-3A0A0C4DH29 117 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 FGF16O43320 207 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 IGKV1D-33P01593 117 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 IGKV1-33P01594 117 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 AMY1AP04745 511 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 AMY2AP04746 511 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 CD28P10747 220 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 FAUP35544 74 aaKnown RBP13.26□□□□□ -0.29
PKP3-209ENST00000533069 ZNF137PP52743 207 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 DEFA1P59665 94 aa13.26□□□□□ -0.29
PKP3-209ENST00000533069 DEFA3P59666 94 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms