RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CXorf21Q9HAI6 301 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 RETNQ9HD89 108 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.32□□□□□ -2.04
CTR9-204ENST00000529355 HRASLS2Q9NWW9 162 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 DHCR7Q9UBM7 475 aaKnown RBP2.32□□□□□ -2.04
CTR9-204ENST00000529355 HHLA2Q9UM44 414 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 KCNE3Q9Y6H6 103 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 S4R3C0 116 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TSPOAP1O95153 1857 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 FLT4P35916 1363 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 NSD3Q9BZ95 1437 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 ATP10BO94823 1461 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 ERVK-7P63135 1459 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 ABCC2Q92887 1545 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 ABCA6Q8N139 1617 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 MROH1Q8NDA8 1641 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 MARF1Q9Y4F3 1742 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 ECM29Q5VYK3 1845 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 KIF13BQ9NQT8 1826 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 IGHV1OR15-9A0A0B4J2B8 117 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 TRAPPC13A5PLN9 417 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 NCBP2LA6PVI3 153 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 A8MWP6 167 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 F6UZH7 168 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 M0R3G1 203 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 PDE6DO43924 150 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 S1PR2O95136 353 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 CDRT1O95170 752 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 HLA-DQB1P01920 261 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 C1QCP02747 245 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 CD74P04233 296 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 ISG15P05161 165 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 CD2P06729 351 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 SERPINE2P07093 398 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 CTSLP07711 333 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 UCHL1P09936 223 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 RNASE2P10153 161 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 AKR1C4P17516 323 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 CRHBPP24387 322 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 KDELR1P24390 212 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 CXCR1P25024 350 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 AQP4P55087 323 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 PIGPP57054 158 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 TCTAP57738 103 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 RRAS2P62070 204 aaPredicted RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 PPP1CBP62140 327 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 RANP62826 216 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 HBA1P69905 142 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 LCN2P80188 198 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 GNA12Q03113 381 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 ZNF266Q14584 549 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 PLPPR5Q32ZL2 321 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 ARHGAP11BQ3KRB8 267 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 PYCR3Q53H96 274 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 MPV17L2Q567V2 206 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 COL5A1-AS1Q5SY13 56 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 FAM78BQ5VT40 261 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 ADNP2Q6IQ32 1131 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 ASCL4Q6XD76 172 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 NAA40Q86UY6 237 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 OR6V1Q8N148 313 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 GPR26Q8NDV2 337 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 OR4P4Q8NGL7 312 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 OR13C4Q8NGS5 318 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 OR6N2Q8NGY6 317 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 LGALS14Q8TCE9 139 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 CYGBQ8WWM9 190 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 NRGNQ92686 78 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 MAGOHBQ96A72 148 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 ISOC2Q96AB3 205 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 TMEM159Q96B96 161 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 RCN3Q96D15 328 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 DCUN1D1Q96GG9 259 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 PYURFQ96I23 114 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 BTN2A3PQ96KV6 586 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 JSRP1Q96MG2 331 aaPredicted RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 LINC00052Q96N35 136 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 RNF157Q96PX1 679 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 OR7D2Q96RA2 312 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 OR52E6Q96RD3 313 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 MICU1Q9BPX6 476 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 MAP1LC3CQ9BXW4 147 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 MFSD1Q9H3U5 465 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 C1orf198Q9H425 327 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 C8orf17Q9NRJ1 99 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 VPS29Q9UBQ0 182 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 LGALS13Q9UHV8 139 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 TRMT112Q9UI30 125 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 NXT1Q9UKK6 140 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 FBXO5Q9UKT4 447 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 ABCB11O95342 1321 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 NOS1P29475 1434 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 HMGXB3Q12766 1538 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 ADCY10Q96PN6 1610 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 KIF1AQ12756 1690 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 PPRC1Q5VV67 1664 aaKnown RBP2.31□□□□□ -2.04
CTR9-204ENST00000529355 IFT172Q9UG01 1749 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 TANC1Q9C0D5 1861 aa2.31□□□□□ -2.04
CTR9-204ENST00000529355 A0A096LPI6 279 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms