RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 H7C2Y5 167 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 OVOL1O14753 267 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 SRMP19623 302 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 CHRNA7P36544 502 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 RPL39P5Q59GN2 51 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 ZNF660Q6AZW8 331 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 CEACAM19Q7Z692 300 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 ZNF429Q86V71 674 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 NICN1Q9BSH3 213 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 MND1Q9BWT6 205 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 IFI27L2Q9H2X8 130 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 SLC23A1Q9UHI7 598 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 SMAD5-AS1Q9Y6J3 95 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 TMEM267Q0VDI3 215 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 C1orf100Q5SVJ3 147 aa17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 ASPHD1Q5U4P2 390 aa17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 GLDNQ6ZMI3 551 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 LRRTM1Q86UE6 522 aa17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 MINDY2Q8NBR6 621 aa17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 PHYHIPQ92561 330 aa17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 ALX4Q9H161 411 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 KCNK15Q9H427 330 aa17.37■□□□□ 0.37
TRAPPC4-208ENST00000527680 RRHO14718 337 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 SAP30O75446 220 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 NDUFA3O95167 84 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 CT45A6P0DMU7 189 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 CT45A5P0DMU8 189 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 CT45A7P0DMV0 189 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 MC5RP33032 325 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 CX3CL1P78423 397 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 HSD17B12Q53GQ0 312 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 FAM71F2Q6NXP2 309 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 SVOPQ8N4V2 548 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 CASTOR1Q8WTX7 329 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 ABHD14BQ96IU4 210 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 CLCC1Q96S66 551 aa17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 FOXA2Q9Y261 457 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC4-208ENST00000527680 HSPA12AO43301 675 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 CDK1P06493 297 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 CEACAM6P40199 344 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 MED22Q15528 200 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 FBLIM1Q8WUP2 373 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 TM2D1Q9BX74 207 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 GHITMQ9H3K2 345 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 RIMS4Q9H426 269 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 ISYNA1Q9NPH2 558 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 FKBP14Q9NWM8 211 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 RNF150Q9ULK6 438 aa17.35■□□□□ 0.37
TRAPPC4-208ENST00000527680 OR5H14A6NHG9 310 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 LINC01619G3V211 115 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 FCN1O00602 326 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 NAPSAO96009 420 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 CD40LGP29965 261 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 SLURP1P55000 103 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 UNC119Q13432 240 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 SPHARQ15513 63 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 MOB1BQ7L9L4 216 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 KMT2CQ8NEZ4 4911 aaKnown RBP17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 DLX4Q92988 240 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 URM1Q9BTM9 101 aaKnown RBP17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 VCXQ9H320 206 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 SCN3BQ9NY72 215 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 WASHC3Q9Y3C0 194 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 FBXO7Q9Y3I1 522 aa17.34■□□□□ 0.37
TRAPPC4-208ENST00000527680 BPNT1O95861 308 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 ZBTB25P24278 435 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 NDPQ00604 133 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 OGFRL1Q5TC84 451 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 ZNF880Q6PDB4 577 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 UNQ5815/PRO19632Q6UWF5 114 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 PPP1R27Q86WC6 154 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 TCTEX1D1Q8N7M0 179 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 TMEM203Q969S6 136 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 MS4A10Q96PG2 267 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 TOLLIPQ9H0E2 274 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 PARP12Q9H0J9 701 aaKnown RBP17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 PLGRKTQ9HBL7 147 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 AK3Q9UIJ7 227 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 NUBP2Q9Y5Y2 271 aa17.33■□□□□ 0.36
TRAPPC4-208ENST00000527680 TMEM14DPA8MWL7 114 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 H0YJW9 148 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 SLC22A1O15245 554 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 SOCS1O15524 211 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 SOX15O60248 233 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 RBBP9O75884 186 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 P2RY14Q15391 338 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 ACTBL2Q562R1 376 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 RNLSQ5VYX0 342 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 DRAXINQ8NBI3 349 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 OR6M1Q8NGM8 313 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 EDARADDQ8WWZ3 215 aa17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 HDHD3Q9BSH5 251 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 FAM103A1Q9BTL3 118 aaKnown RBP17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 C11orf54Q9H0W9 315 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 METTL1Q9UBP6 276 aaKnown RBP17.32■□□□□ 0.36
TRAPPC4-208ENST00000527680 IGHV3-11P01762 117 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 LGALS1P09382 135 aaKnown RBP17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 ARSBP15848 533 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 CPEP16870 476 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 RPS16P62249 146 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms