RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 EGLN3Q9H6Z9 239 aa3.12□□□□□ -1.91
CLNS1A-209ENST00000527299 CMC2Q9NRP2 79 aa3.12□□□□□ -1.91
CLNS1A-209ENST00000527299 VDAC3Q9Y277 283 aa3.12□□□□□ -1.91
CLNS1A-209ENST00000527299 MRPS17Q9Y2R5 130 aaKnown RBP3.12□□□□□ -1.91
CLNS1A-209ENST00000527299 THSD7BQ9C0I4 1608 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TRAV9-2A0A087WT02 112 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 A0A1B0GUS0 222 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TEX48A0A1B0GUV7 120 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 LOC102723971A0A1B0GUV8 181 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 A0A1W2PRE2 83 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GAGE12JA6NER3 117 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GLOD5A6NK44 160 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM212A6NML5 194 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 CD300LBA8K4G0 201 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 FABP5P3A8MUU1 101 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 EEF1E1-BLOC1S5C9J1V9 151 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 F5H768 121 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 H7C1C5 153 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 IFNL4K9M1U5 179 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SAP18O00422 153 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TNFSF14O43557 240 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GCM2O75603 506 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GAGE7O76087 117 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SLC2A10O95528 541 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GAGE12FP0CL80 117 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GAGE12GP0CL81 117 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GAGE12IP0CL82 117 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 C8orf89P0DMQ9 161 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 HIST1H1EP10412 219 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 PGCP20142 388 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 CSRP1P21291 193 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 MDKP21741 143 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 HIST1H1TP22492 207 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 PRPH2P23942 346 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 PPP1CCP36873 323 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 NSG1P42857 185 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 RGRP47804 291 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR1D4P47884 311 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 P2RY1P47900 373 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SLC6A12P48065 614 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 MTCP1P56278 107 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 RPS14P62263 151 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 RPL38P63173 70 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 PITX1P78337 314 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 Q0VG73 95 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GAGE4Q13068 117 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 PAFAH1B3Q15102 231 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM97Q5BJF2 176 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 FAM27D1Q5T7N8 215 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 CST9LP1Q5W188 147 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 FAM90A2PQ658T7 463 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 RHBDD2Q6NTF9 364 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF880Q6PDB4 577 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM207Q6UWW9 146 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM25Q86YD3 366 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 CA13Q8N1Q1 262 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM256Q8N2U0 113 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF676Q8N7Q3 588 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF611Q8N823 705 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR10P1Q8NGE3 313 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR2K2Q8NGT1 345 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR6N2Q8NGY6 317 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR2T10Q8NGZ9 312 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR4C3Q8NH37 302 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR4A5Q8NH83 315 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SYNPRQ8TBG9 265 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SLC38A5Q8WUX1 472 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 FAM131CQ96AQ9 280 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 WDYHV1Q96HA8 205 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 PGLYRP3Q96LB9 341 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 C2orf50Q96LR7 162 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OXGR1Q96P68 337 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 MYADMQ96S97 322 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SDF2Q99470 211 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SPIN2AQ99865 258 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 RARRES2Q99969 163 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SPIN2BQ9BPZ2 258 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 C19orf24Q9BVV8 132 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 RBM24Q9BX46 236 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 GPR174Q9BXC1 333 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR51I1Q9H343 314 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 FAM124BQ9H5Z6 455 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 ISG20L2Q9H9L3 353 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 MANBALQ9NQG1 85 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 PIGVQ9NUD9 493 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SPANXCQ9NY87 97 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SIGLEC8Q9NYZ4 499 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 IL36GQ9NZH8 169 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 OR5V1Q9UGF6 321 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 RALYQ9UKM9 306 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 RARRES3Q9UL19 164 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF443Q9Y2A4 671 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 SIRT4Q9Y6E7 314 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 PXMP4Q9Y6I8 212 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF780BQ9Y6R6 833 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF236Q9UL36 1845 aa3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TRIP12Q14669 1992 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 TNRC6AQ8NDV7 1962 aaKnown RBP3.11□□□□□ -1.91
CLNS1A-209ENST00000527299 DOCK6Q96HP0 2047 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 UBR3Q6ZT12 1888 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms