RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 LURAP1Q96LR2 239 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 RBM7Q9Y580 266 aaKnown RBP15.65■□□□□ 0.1
VPS28-207ENST00000526977 KIAA2026Q5HYC2 2103 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 NKX6-3A6NJ46 265 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 LYNX1G3V0Z9 82 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 WNT2P09544 360 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 LYNX1P0DP58 116 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 FAM53AQ6NSI3 398 aaPredicted RBP15.65■□□□□ 0.1
VPS28-207ENST00000526977 ZNF295-AS1Q8N0V1 137 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 OR52L2PQ8NGH6 319 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 OR13A1Q8NGR1 328 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 STOML3Q8TAV4 291 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 RBPMSQ93062 196 aaKnown RBP15.65■□□□□ 0.1
VPS28-207ENST00000526977 GAFA1Q96PS6 74 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 CCL13Q99616 98 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 REG4Q9BYZ8 158 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 MED9Q9NWA0 146 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 TANC2Q9HCD6 1990 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 DSCAMO60469 2012 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 TNFRSF13BO14836 293 aaPredicted RBP15.64■□□□□ 0.09
VPS28-207ENST00000526977 SIGLEC5O15389 551 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 RPL12P30050 165 aaKnown RBP15.64■□□□□ 0.09
VPS28-207ENST00000526977 P2RX3P56373 397 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 TMEM33P57088 247 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 AANATQ16613 207 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 TOR2AQ5JU69 321 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 OR51H1Q8NH63 302 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 IL22RA2Q969J5 263 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 CCL19Q99731 98 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 DCTN5Q9BTE1 182 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 TOLLIPQ9H0E2 274 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 CHODLQ9H9P2 273 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 ZFP57Q9NU63 452 aa15.64■□□□□ 0.09
VPS28-207ENST00000526977 DUXBA0A1W2PPF3 345 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 TMPRSS2O15393 492 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 FAM74A1Q5RGS3 127 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 RAB1CQ92928 201 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 MARVELD3Q96A59 401 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 TIMD4Q96H15 378 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 PSMG3-AS1Q96PY0 264 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 SLC25A32Q9H2D1 315 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 KAAG1Q9UBP8 84 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 E5RGE8 158 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 ST8SIA3O43173 380 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 VDAC1P21796 283 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 EDDM3AQ14507 147 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 NMSQ5H8A3 153 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 PDZD9Q8IXQ8 264 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 ARL11Q969Q4 196 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 NCOR1P1Q9H4R4 102 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 NSG2Q9Y328 171 aa15.63■□□□□ 0.09
VPS28-207ENST00000526977 DCHS2Q6V1P9 2916 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 ADAM20O43506 726 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 LY6HO94772 140 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 SSTR5P35346 364 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 GNMTQ14749 295 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 BAP18Q8IXM2 172 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 DRAM1Q8N682 238 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 PLEKHA2Q9HB19 425 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 KCNS2Q9ULS6 477 aa15.62■□□□□ 0.09
VPS28-207ENST00000526977 MEX3AA1L020 520 aaKnown RBP15.61■□□□□ 0.09
VPS28-207ENST00000526977 MFSD2BA6NFX1 497 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 C15orf65H3BRN8 121 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 I3L521 148 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 IGHV2-70P01814 119 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 TPT1P13693 172 aaKnown RBP15.61■□□□□ 0.09
VPS28-207ENST00000526977 COL8A1P27658 744 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 DMBX1Q8NFW5 382 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 RFESDQ8TAC1 157 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 ZC4H2Q9NQZ6 224 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 RNF150Q9ULK6 438 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 POMT1Q9Y6A1 747 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 ODAMA1E959 279 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 SERPINE2P07093 398 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 CR1LQ2VPA4 569 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 FAM216BQ8N7L0 139 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 SPIN2AQ99865 258 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 SPIN2BQ9BPZ2 258 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 SDHAF2Q9NX18 166 aa15.61■□□□□ 0.09
VPS28-207ENST00000526977 USP9YO00507 2555 aaPredicted RBP15.6■□□□□ 0.09
VPS28-207ENST00000526977 TAAR5O14804 337 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 GZMHP20718 246 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 PPP1CCP36873 323 aaKnown RBP15.6■□□□□ 0.09
VPS28-207ENST00000526977 TRAT1Q6PIZ9 186 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 OR2S2Q9NQN1 319 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 RCL1Q9Y2P8 373 aaKnown RBP15.6■□□□□ 0.09
VPS28-207ENST00000526977 UTP20O75691 2785 aaKnown RBP15.6■□□□□ 0.09
VPS28-207ENST00000526977 SPINT2O43291 252 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 PPIHO43447 177 aaKnown RBP15.6■□□□□ 0.09
VPS28-207ENST00000526977 NDUFS7O75251 213 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 IGKV1-39P01597 117 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 IGKV1D-39P04432 117 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 ZNF585BQ52M93 769 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 CXorf66Q5JRM2 361 aaPredicted RBP15.6■□□□□ 0.09
VPS28-207ENST00000526977 ZNF645Q8N7E2 425 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 NINJ1Q92982 152 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 C11orf1Q9H5F2 150 aa15.6■□□□□ 0.09
VPS28-207ENST00000526977 SLC25A10Q9UBX3 287 aaPredicted RBP15.6■□□□□ 0.09
VPS28-207ENST00000526977 NDUFB3O43676 98 aa15.59■□□□□ 0.09
VPS28-207ENST00000526977 SELLP14151 372 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms