RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 OR51T1Q8NGJ9 327 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 OR51F2Q8NH61 342 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF671Q8TAW3 534 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PLPPR1Q8TBJ4 325 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 DYNC2LI1Q8TCX1 351 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TNFAIP8L1Q8WVP5 186 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PHYHIPQ92561 330 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 DYRK2Q92630 601 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 EMG1Q92979 244 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 FAM46BQ96A09 425 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 C12orf43Q96C57 262 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ISOC1Q96CN7 298 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TECTBQ96PL2 329 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 MYCBPQ99417 103 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 CCL13Q99616 98 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 REG4Q9BYZ8 158 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 FAM192AQ9GZU8 254 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 SHARPINQ9H0F6 387 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 LPAR5Q9H1C0 372 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 BANF2Q9H503 90 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 FN3KRPQ9HA64 309 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PATZ1Q9HBE1 687 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 HMG20AQ9NP66 347 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ABCB9Q9NP78 766 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM138Q9NPI0 162 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PRR34Q9NV39 138 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 OR5V1Q9UGF6 321 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ELF5Q9UKW6 265 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TP53TG3Q9ULZ0 132 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 SLC7A11Q9UPY5 501 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PPIAL4AQ9Y536 164 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PLXNB1O43157 2135 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 TRAV39A0A0B4J263 110 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 TRAV24A0A0B4J272 114 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ISPDA4D126 451 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 IFITM5A6NNB3 132 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 A8MXK9 166 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 J3QR06 171 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 AIPO00170 330 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 LGALS8O00214 317 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 NDUFS8O00217 210 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SIRPB1O00241 398 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SLC33A1O00400 549 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SOCS1O15524 211 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 PHF1O43189 567 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ADAM20O43506 726 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF737O75373 536 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ARL6IP5O75915 188 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 NXPH2O95156 264 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 FSTL3O95633 263 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 CSF3P09919 207 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 PTHLHP12272 177 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 RPS2P15880 293 aaKnown RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MUC1P15941 1255 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SLC25A16P16260 332 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MGMTP16455 207 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 GABRR1P24046 479 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MYL9P24844 172 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MDH2P40926 338 aaKnown RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 GABRA2P47869 451 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 OR3A1P47881 315 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SERPINB10P48595 397 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 RBM11P57052 281 aaKnown RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM33P57088 247 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 FGF12P61328 243 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 RPS27AP62979 156 aaKnown RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 PPP3R1P63098 170 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 PRB3Q04118 309 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 LOXL1Q08397 574 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 UBE2V1Q13404 147 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MADCAM1Q13477 382 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF273Q14593 569 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 TAF9Q16594 264 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM249Q2WGJ8 235 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SLC22A6Q4U2R8 563 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM155Q4W5P6 130 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 NHLRC3Q5JS37 347 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 LCE3AQ5TA76 89 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SHEQ5VZ18 495 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 WDR25Q64LD2 544 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 OLFML2AQ68BL7 652 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 GLT8D1Q68CQ7 371 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ELP2Q6IA86 826 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 CLEC2AQ6UVW9 174 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 BAIAP2L2Q6UXY1 529 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SPNS3Q6ZMD2 512 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 GLDNQ6ZMI3 551 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 GDPGP1Q6ZNW5 385 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 CDH26Q8IXH8 852 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MKXQ8IYA7 352 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SAXO1Q8IYX7 474 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 FAM58AQ8N1B3 248 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 OSR2Q8N2R0 312 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 BPIFB2Q8N4F0 458 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 C11orf42Q8N5U0 333 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 NKAIN3Q8N8D7 197 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ZSCAN4Q8NAM6 433 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 OR4S1Q8NGB4 309 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 OR6M1Q8NGM8 313 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms