RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PSMB9	P28065	219 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	FMO3	P31513	532 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	GGT2	P36268	569 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	NUDT1	P36639	197 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	GCLM	P48507	274 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	CDK9	P50750	372 aa	Known RBP	3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	NDUFA8	P51970	172 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	FGF8	P55075	233 aa	Predicted RBP	3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	CDKN2D	P55273	166 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	RPS21	P63220	83 aa	Known RBP	3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	ADIG	Q0VDE8	80 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	PPP1R1A	Q13522	171 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	GINS1	Q14691	196 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	KIAA0087	Q14695	138 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	ZNF630	Q2M218	657 aa	Predicted RBP	3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	LRRC75B	Q2VPJ9	315 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	CEACAM16	Q2WEN9	425 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	FAM72A	Q5TYM5	149 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	ANKRD22	Q5VYY1	191 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	FAM72D	Q6L9T8	149 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	ZNF544	Q6NX49	715 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	RFLNA	Q6ZTI6	216 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	FAM220A	Q7Z4H9	259 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	FAM72B	Q86X60	149 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	LRRC25	Q8N386	305 aa	Predicted RBP	3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	CLDN22	Q8N7P3	220 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356		Q8NBF4	154 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	C11orf72	Q8NBR9	251 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	RASSF5	Q8WWW0	418 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	FAM3D	Q96BQ1	224 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	PPCDC	Q96CD2	204 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	RNF185	Q96GF1	192 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	PECR	Q9BY49	303 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	TRIM15	Q9C019	465 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	PCBD2	Q9H0N5	130 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	TMEM100	Q9NV29	134 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	DHRS4-AS1	Q9P1J3	65 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	PAK5	Q9P286	719 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	CACNG5	Q9UF02	275 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	SEC16A	O15027	2179 aa		3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	FBN1	P35555	2871 aa	Known RBP	3.19	□□□□□ -1.9
PCM1-223	ENST00000524356	TRAV9-2	A0A087WT02	112 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	IGHV7-81	A0A0B4J1V7	117 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	METTL15	A6NJ78	407 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	TMX2-CTNND1	H3BSU7	103 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	C19orf84	I3L1E1	186 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356		J3QT63	122 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	XKRY	O14609	159 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	BET1	O15155	118 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	RTL8C	O15255	209 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	ZNF253	O75346	499 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	DHFR	P00374	187 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	IGHV3-48	P01763	117 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	MMP7	P09237	267 aa	Predicted RBP	3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	CSF3	P09919	207 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	SPTB	P11277	2137 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	ADRB3	P13945	408 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	TCN2	P20062	427 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	CA5A	P35218	305 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	NCBP2	P52298	156 aa	Known RBP eCLIP	3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	CRYBA4	P53673	196 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	MTPN	P58546	118 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	EGFEM1P	Q0D2K5	195 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	SKP2	Q13309	424 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	PON3	Q15166	354 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	IRF4	Q15306	451 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	OR2B11	Q5JQS5	317 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	AVPI1	Q5T686	147 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	SPNS3	Q6ZMD2	512 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	LINC00173	Q6ZV60	143 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	SLC36A1	Q7Z2H8	476 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	OAF	Q86UD1	273 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	PHF13	Q86YI8	300 aa	Predicted RBP	3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	NKAPP1	Q8N9T2	125 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	GPR26	Q8NDV2	337 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	OR10J5	Q8NHC4	309 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356		Q8WTZ3	238 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	EEF1AKMT1	Q8WVE0	214 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	ITLN1	Q8WWA0	313 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	RGP1	Q92546	391 aa	Predicted RBP	3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	LRRC58	Q96CX6	371 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	RMND5B	Q96G75	393 aa	Predicted RBP	3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	PDXP	Q96GD0	296 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	FCRL1	Q96LA6	429 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	BIRC8	Q96P09	236 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	OR2V2	Q96R30	315 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	ATOH8	Q96SQ7	321 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	PITX2	Q99697	317 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	FAAP24	Q9BTP7	215 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	TAPBPL	Q9BX59	468 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	GABARAPL3	Q9BY60	117 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	SLIRP	Q9GZT3	109 aa	Known RBP	3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	VSIR	Q9H7M9	311 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	JPT2	Q9H910	190 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	ISG20L2	Q9H9L3	353 aa	Known RBP	3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	FGF22	Q9HCT0	170 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	CISH	Q9NSE2	258 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	FAIM	Q9NVQ4	179 aa		3.18	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms