RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 PTPRSQ13332 1948 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 EML5Q05BV3 1969 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 IGLV4-69A0A075B6H9 119 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 IGKV1-8A0A0C4DH67 115 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 IGHV5-10-1A0A0J9YXX1 117 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 CHST10O43529 356 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 GSTZ1O43708 216 aaPredicted RBP3.69□□□□□ -1.82
SKP1-213ENST00000524288 HPGDSO60760 199 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 FOXH1O75593 365 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 RP2O75695 350 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 CRYGCP07315 174 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 STAG3L2P0CL84 134 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 SULT1A3P0DMM9 295 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 SULT1A4P0DMN0 295 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 C1GALT1C1LP0DN25 315 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 PSKH1P11801 424 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 UGT2B7P16662 529 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TCN2P20062 427 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 PRKACBP22694 351 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 KIR3DL2P43630 455 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TGM4P49221 684 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 UCNP55089 124 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TAS2R46P59540 309 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 CTAG1AP78358 180 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TSPAN31Q12999 210 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 GPR176Q14439 515 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TRAM1Q15629 374 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 HENMT1Q5T8I9 393 aaKnown RBP3.69□□□□□ -1.82
SKP1-213ENST00000524288 AADACL4Q5VUY2 407 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 H3F3CQ6NXT2 135 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 C22orf39Q6P5X5 142 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TMEM91Q6ZNR0 172 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 RASSF6Q6ZTQ3 369 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TBC1D19Q8N5T2 526 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 Q8N9L7 120 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 C19orf18Q8NEA5 215 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 ZNF680Q8NEM1 530 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TET1Q8NFU7 2136 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 OR4K5Q8NGD3 323 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 OR4D11Q8NGI4 311 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 ASZ1Q8WWH4 475 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 CYYR1Q96J86 154 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 UTP23Q9BRU9 249 aaKnown RBP3.69□□□□□ -1.82
SKP1-213ENST00000524288 BEX2Q9BXY8 128 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 SLC17A9Q9BYT1 436 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 PLEKHA1Q9HB21 404 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 PATZ1Q9HBE1 687 aaKnown RBP3.69□□□□□ -1.82
SKP1-213ENST00000524288 LHX9Q9NQ69 397 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 HSPB11Q9Y547 144 aa3.69□□□□□ -1.82
SKP1-213ENST00000524288 TSSC4Q9Y5U2 329 aaPredicted RBP3.69□□□□□ -1.82
SKP1-213ENST00000524288 GNG14A0A1W2PPG7 69 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 A6NDN8 102 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 SLC22A20A6NK97 555 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 C5orf58C9J3I9 102 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 C5orf67F2Z3F1 127 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 G3V3Q6 166 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 K7ERQ8 282 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 HMGN4O00479 90 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 FABP7O15540 132 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 ERI3O43414 337 aaKnown RBP3.68□□□□□ -1.82
SKP1-213ENST00000524288 NDUFA2O43678 99 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 SC5DO75845 299 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 SOX14O95416 240 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 EPPINO95925 133 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 DHFRP00374 187 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 IFNA7P01567 189 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 IL3P08700 152 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 OR12D1P0DN82 309 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 IFNGR2P38484 337 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 RBM34P42696 430 aaKnown RBP3.68□□□□□ -1.82
SKP1-213ENST00000524288 PPOXP50336 477 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 TBPL1P62380 186 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 REEP5Q00765 189 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 SLC36A2Q495M3 483 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 KLHL12Q53G59 568 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 FAM78AQ5JUQ0 283 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 SMARCD3Q6STE5 483 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 GID4Q8IVV7 300 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 SPICQ8N5J4 248 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 EIF4E3Q8N5X7 224 aaKnown RBP3.68□□□□□ -1.82
SKP1-213ENST00000524288 C15orf56Q8N910 161 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 OR51L1Q8NGJ5 315 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 OR8D4Q8NGM9 314 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 CDC26Q8NHZ8 85 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 TEX47Q8TBZ9 253 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 GNPDA2Q8TDQ7 276 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 BAALCQ8WXS3 180 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 CIDECQ96AQ7 238 aaPredicted RBP3.68□□□□□ -1.82
SKP1-213ENST00000524288 REG4Q9BYZ8 158 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 TM6SF2Q9BZW4 377 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 MED28Q9H204 178 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 PRO3102Q9H379 93 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 GLS2Q9UI32 602 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 SCP2D1Q9UJQ7 156 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 FBXL3Q9UKT7 428 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 PRELID1Q9Y255 219 aa3.68□□□□□ -1.82
SKP1-213ENST00000524288 TRAV19A0A0A6YYK7 116 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 TRAV1-2A0A0B4J238 106 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 A0A0J9YXV3 536 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 A0A1B0GUH1 482 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms