RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 FBXW12Q6X9E4 464 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 LINC00336Q6ZUF6 198 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 HSD11B1LQ7Z5J1 315 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 TSEN54Q7Z6J9 526 aaKnown RBP3.64□□□□□ -1.83
CDKL3-209ENST00000523054 LDLRAD3Q86YD5 345 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 LRRC25Q8N386 305 aaPredicted RBP3.64□□□□□ -1.83
CDKL3-209ENST00000523054 GCSAMQ8N6F7 178 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 TEX45Q8NA69 505 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 CHST4Q8NCG5 386 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 ZNF439Q8NDP4 499 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 OR10V1Q8NGI7 309 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 OR10G4Q8NGN3 311 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 THAP6Q8TBB0 222 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 GPR119Q8TDV5 335 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 SSMEM1Q8WWF3 244 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 TAF15Q92804 592 aaKnown RBP eCLIP3.64□□□□□ -1.83
CDKL3-209ENST00000523054 IL22RA2Q969J5 263 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 MALSU1Q96EH3 234 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 MRPS24Q96EL2 167 aaKnown RBP3.64□□□□□ -1.83
CDKL3-209ENST00000523054 IMP4Q96G21 291 aaKnown RBP3.64□□□□□ -1.83
CDKL3-209ENST00000523054 RITA1Q96K30 269 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 SLC35E1Q96K37 410 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 DUX3Q96PT4 197 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 NEDD4LQ96PU5 975 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 GINS3Q9BRX5 216 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 TTTY12Q9BZ98 90 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 HEXA-AS1Q9H8Q6 139 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 SPANXB1Q9NS25 103 aaPredicted RBP3.64□□□□□ -1.83
CDKL3-209ENST00000523054 SLC7A10Q9NS82 523 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 RBFOX1Q9NWB1 397 aaKnown RBP3.64□□□□□ -1.83
CDKL3-209ENST00000523054 SPRR3Q9UBC9 169 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 OPTCQ9UBM4 332 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 WDR83OSQ9Y284 106 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 ETV7Q9Y603 341 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 RFNGQ9Y644 331 aa3.64□□□□□ -1.83
CDKL3-209ENST00000523054 SRRM2Q9UQ35 2752 aaKnown RBP3.64□□□□□ -1.83
CDKL3-209ENST00000523054 A0A1W2PP11 408 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 WI2-2373I1.2A0A1W2PRP0 233 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 CLPSL1A2RUU4 121 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 MAP1LC3B2A6NCE7 125 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 A8MVM7 634 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 C16orf97H3BN30 126 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 PHOX2AO14813 284 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 IGLV3-25P01717 112 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 MT-ND4LP03901 98 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 P04436 131 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 SFTPBP07988 381 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 NGFRP08138 427 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 MYL9P24844 172 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 PRDX3P30048 256 aaKnown RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 GRPRP30550 384 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 RPL4P36578 427 aaKnown RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 FOXG1P55316 489 aaPredicted RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 TMEM50BP56557 158 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 TAS2R30P59541 319 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 KRTAP10-3P60369 221 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 EIF5AP63241 154 aaKnown RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 PLCXD2Q0VAA5 305 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 ST3GAL4Q11206 333 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 OR2F1Q13607 317 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 EDDM3AQ14507 147 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 TBC1D28Q2M2D7 210 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 RPEL1Q2QD12 228 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 SNAI3Q3KNW1 292 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 MORN2Q502X0 79 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 NHLRC3Q5JS37 347 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 CLEC12AQ5QGZ9 265 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 FRG2Q64ET8 278 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 Q6ZSR9 355 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 C5orf24Q7Z6I8 188 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 SLC22A15Q8IZD6 547 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 ZNF664Q8N3J9 261 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 MS4A15Q8N5U1 240 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 METTL27Q8N6F8 245 aaPredicted RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 POC1AQ8NBT0 407 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 OR10D4PQ8NGN7 298 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 SYNPRQ8TBG9 265 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 ZNF431Q8TF32 576 aaPredicted RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 EEF1AKMT1Q8WVE0 214 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 OR5P2Q8WZ92 322 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 PTX4Q96A99 478 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 LRRC58Q96CX6 371 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 TEX37Q96LM6 180 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 GPR82Q96P67 336 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 RBP7Q96R05 134 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 NRIP2Q9BQI9 281 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 ACTR3CQ9C0K3 210 aaPredicted RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 MAP1LC3BQ9GZQ8 125 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 MAP1LC3AQ9H492 121 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 FNDC4Q9H6D8 234 aaPredicted RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 KLHL13Q9P2N7 655 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 GNG12Q9UBI6 72 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 NUFIP1Q9UHK0 495 aaKnown RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 TRAPPC2LQ9UL33 140 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 YARS2Q9Y2Z4 477 aaKnown RBP3.63□□□□□ -1.83
CDKL3-209ENST00000523054 WSB1Q9Y6I7 421 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 NINQ8N4C6 2090 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 A0A087WUJ7 227 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 ATP6AP2A0A1C7CYW4 349 aa3.63□□□□□ -1.83
CDKL3-209ENST00000523054 A0A1W2PRE2 83 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms