RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 GEMIN2O14893 280 aaKnown RBP4.79□□□□□ -1.64
PABPC1-220ENST00000522658 TPPPO94811 219 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 CDRT1O95170 752 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 LY6G6CO95867 125 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 HBZP02008 142 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 TRGV3P03979 118 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 TFAP2AP05549 437 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 RBMY1DP0C7P1 496 aaKnown RBP4.79□□□□□ -1.64
PABPC1-220ENST00000522658 CGB3P0DN86 165 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 CGB7P0DN87 165 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 EPHA2P29317 976 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 ZNF93P35789 620 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-220ENST00000522658 ZNF85Q03923 595 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 RAB40BQ12829 278 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 CBX3Q13185 183 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 RPEL1Q2QD12 228 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 SLC22A6Q4U2R8 563 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 ASPHD1Q5U4P2 390 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 MEDAGQ5VYS4 303 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 ZNF660Q6AZW8 331 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-220ENST00000522658 KDM4DQ6B0I6 523 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 AWAT2Q6E213 333 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 FAM53AQ6NSI3 398 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-220ENST00000522658 Q8N402 240 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 PARP16Q8N5Y8 322 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 TMEM104Q8NE00 496 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 OR4K15Q8NH41 348 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 GPR148Q8TDV2 347 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 DYNLRB2Q8TF09 96 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 PELI1Q96FA3 418 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 MS4A10Q96PG2 267 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 CIB1Q99828 191 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 MRPL20Q9BYC9 149 aaKnown RBP4.79□□□□□ -1.64
PABPC1-220ENST00000522658 ANKRD60Q9BZ19 345 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 EDA2RQ9HAV5 297 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 CHMP1AQ9HD42 196 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-220ENST00000522658 RANGRFQ9HD47 186 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-220ENST00000522658 SLC2A8Q9NY64 477 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 TAS2R4Q9NYW5 299 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 PEMTQ9UBM1 199 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 STEAP1Q9UHE8 339 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 JPT1Q9UK76 154 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 CEPT1Q9Y6K0 416 aa4.79□□□□□ -1.64
PABPC1-220ENST00000522658 IGHV7-81A0A0B4J1V7 117 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 TCRBV3S1A0A5B6 114 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 CXorf65A6NEN9 183 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 MARCH11A6NNE9 402 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 A8MZ25 164 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 C15orf65H3BRN8 121 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 SLC22A1O15245 554 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 SLC31A2O15432 143 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 CA11O75493 328 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 CNIH1O95406 144 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 FADS2O95864 444 aaKnown RBP4.78□□□□□ -1.64
PABPC1-220ENST00000522658 APOA2P02652 100 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 MAS1P04201 325 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 PPIFP30405 207 aaKnown RBP4.78□□□□□ -1.64
PABPC1-220ENST00000522658 BDKRB2P30411 391 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 ZNF137PP52743 207 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 CD81P60033 236 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 NHLH2Q02577 135 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 RIPK1Q13546 671 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 ATP6AP1Q15904 470 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 HAGHQ16775 308 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 LRRC36Q1X8D7 754 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 MOGAT2Q3SYC2 334 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 NHLRC3Q5JS37 347 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 FAM131AQ6UXB0 335 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 ZNF497Q6ZNH5 498 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 PPP1R27Q86WC6 154 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 SYS1Q8N2H4 156 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 JAGN1Q8N5M9 183 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 GRPEL2Q8TAA5 225 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 CASTOR1Q8WTX7 329 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 TRUB1Q8WWH5 349 aaKnown RBP4.78□□□□□ -1.64
PABPC1-220ENST00000522658 IL1F10Q8WWZ1 152 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 RGP1Q92546 391 aaPredicted RBP4.78□□□□□ -1.64
PABPC1-220ENST00000522658 TMEM106AQ96A25 262 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 GALMQ96C23 342 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 CLCC1Q96S66 551 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 PHB2Q99623 299 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 PDCD1LG2Q9BQ51 273 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 FAM110AQ9BQ89 295 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 GABARAPL3Q9BY60 117 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 GABARAPL1Q9H0R8 117 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 IFT22Q9H7X7 185 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 TMEM138Q9NPI0 162 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 PLSCR3Q9NRY6 295 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 ZNF446Q9NWS9 450 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 IL36GQ9NZH8 169 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 PIPOXQ9P0Z9 390 aa4.78□□□□□ -1.64
PABPC1-220ENST00000522658 TENM2Q9NT68 2774 aa4.77□□□□□ -1.65
PABPC1-220ENST00000522658 MAGEA13PA6NCF6 341 aa4.77□□□□□ -1.65
PABPC1-220ENST00000522658 FAM90A10PA6NDY2 464 aa4.77□□□□□ -1.65
PABPC1-220ENST00000522658 OR5H14A6NHG9 310 aa4.77□□□□□ -1.65
PABPC1-220ENST00000522658 OR4C45A6NMZ5 311 aa4.77□□□□□ -1.65
PABPC1-220ENST00000522658 RRHO14718 337 aa4.77□□□□□ -1.65
PABPC1-220ENST00000522658 MPPED1O15442 326 aa4.77□□□□□ -1.65
PABPC1-220ENST00000522658 CRTAPO75718 401 aaPredicted RBP4.77□□□□□ -1.65
PABPC1-220ENST00000522658 CIB2O75838 187 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms