RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SOX21Q9Y651 276 aaPredicted RBP19.6■□□□□ 0.73
PVT1-212ENST00000521951 NAV3Q8IVL0 2385 aa19.6■□□□□ 0.73
PVT1-212ENST00000521951 IGKV1D-13A0A0B4J2D9 117 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 DISC1C4P0D8 188 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 UPK1BO75841 260 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 IGKV1-13P0DP09 117 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 LUMP51884 338 aaPredicted RBP19.59■□□□□ 0.73
PVT1-212ENST00000521951 TMEM17Q86X19 198 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 ODF3L1Q8IXM7 274 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 LYG1Q8N1E2 194 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 DEDD2Q8WXF8 326 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 AJUBAQ96IF1 538 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 DPM3Q9P2X0 92 aa19.59■□□□□ 0.73
PVT1-212ENST00000521951 AMMECR1Q9Y4X0 333 aaPredicted RBP19.59■□□□□ 0.73
PVT1-212ENST00000521951 RBM7Q9Y580 266 aaKnown RBP19.59■□□□□ 0.73
PVT1-212ENST00000521951 INAFM1C9JVW0 142 aa19.58■□□□□ 0.73
PVT1-212ENST00000521951 LY6LH3BQJ8 138 aa19.58■□□□□ 0.73
PVT1-212ENST00000521951 EPHA1P21709 976 aa19.58■□□□□ 0.73
PVT1-212ENST00000521951 FAUP35544 74 aaKnown RBP19.58■□□□□ 0.73
PVT1-212ENST00000521951 MINOS1Q5TGZ0 78 aa19.58■□□□□ 0.73
PVT1-212ENST00000521951 C17orf50Q8WW18 174 aa19.58■□□□□ 0.73
PVT1-212ENST00000521951 BEX2Q9BXY8 128 aa19.58■□□□□ 0.73
PVT1-212ENST00000521951 MS4A7Q9GZW8 240 aaPredicted RBP19.58■□□□□ 0.73
PVT1-212ENST00000521951 MINOS1-NBL1R4GNA1 71 aa19.58■□□□□ 0.73
PVT1-212ENST00000521951 LEUTXA8MZ59 168 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 FXYD4P59646 89 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 HERV-K104P61576 105 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 IFITM3Q01628 133 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 BCL6BQ8N143 479 aaPredicted RBP19.57■□□□□ 0.72
PVT1-212ENST00000521951 OR51S1Q8NGJ8 323 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 FAM216AQ8WUB2 273 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 ST6GALNAC6Q969X2 333 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 CREB3L1Q96BA8 519 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 MOB3AQ96BX8 217 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 MCUBQ9NWR8 336 aa19.57■□□□□ 0.72
PVT1-212ENST00000521951 OR5H14A6NHG9 310 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 PLA2G10O15496 165 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 SCGB2B2Q4G0G5 96 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 C9orf139Q6ZV77 190 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 LHFPL1Q86WI0 220 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 OR2D2Q9H210 308 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 GHITMQ9H3K2 345 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 PIPOXQ9P0Z9 390 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 CDC42EP3Q9UKI2 254 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 A0A0U1RQK1 487 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 RAB29O14966 203 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 IL3RAP26951 378 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 ZNF137PP52743 207 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 DIAPH2-AS1Q14236 149 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 AADACL3Q5VUY0 350 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 DYNAPQ8N1N2 210 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 SECTM1Q8WVN6 248 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 C22orf15Q8WYQ4 148 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 MALSU1Q96EH3 234 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 FXYD6Q9H0Q3 95 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 ZNF221Q9UK13 617 aa19.56■□□□□ 0.72
PVT1-212ENST00000521951 MTORP42345 2549 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 SAA2-SAA4A0A096LPE2 208 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 SAA2P0DJI9 122 aaPredicted RBP19.55■□□□□ 0.72
PVT1-212ENST00000521951 CEACAM3P40198 252 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 GPR12P47775 334 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 TPTE2P1Q5T6R2 138 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 TERB2Q8NHR7 220 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 BORCS5Q969J3 196 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 TOMM40LQ969M1 308 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 PRRT1Q99946 306 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 C7orf50Q9BRJ6 194 aaKnown RBP19.55■□□□□ 0.72
PVT1-212ENST00000521951 SLC5A7Q9GZV3 580 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 HILPDAQ9Y5L2 63 aa19.55■□□□□ 0.72
PVT1-212ENST00000521951 NSD1Q96L73 2696 aaPredicted RBP19.54■□□□□ 0.72
PVT1-212ENST00000521951 PAX6P26367 422 aa19.54■□□□□ 0.72
PVT1-212ENST00000521951 SSX2Q16385 188 aa19.54■□□□□ 0.72
PVT1-212ENST00000521951 RPL39P5Q59GN2 51 aa19.54■□□□□ 0.72
PVT1-212ENST00000521951 ZNF251Q9BRH9 671 aa19.54■□□□□ 0.72
PVT1-212ENST00000521951 CCL28Q9NRJ3 127 aa19.54■□□□□ 0.72
PVT1-212ENST00000521951 SLC2A8Q9NY64 477 aa19.54■□□□□ 0.72
PVT1-212ENST00000521951 SCP2D1Q9UJQ7 156 aa19.54■□□□□ 0.72
PVT1-212ENST00000521951 GAB2Q9UQC2 676 aa19.54■□□□□ 0.72
PVT1-212ENST00000521951 MXRA5Q9NR99 2828 aa19.53■□□□□ 0.72
PVT1-212ENST00000521951 NAP1L6A6NFF2 107 aa19.53■□□□□ 0.72
PVT1-212ENST00000521951 PROP1O75360 226 aa19.53■□□□□ 0.72
PVT1-212ENST00000521951 ZNF645Q8N7E2 425 aa19.53■□□□□ 0.72
PVT1-212ENST00000521951 RPEQ96AT9 228 aa19.53■□□□□ 0.72
PVT1-212ENST00000521951 C5orf30Q96GV9 206 aa19.53■□□□□ 0.72
PVT1-212ENST00000521951 SDHAF2Q9NX18 166 aa19.53■□□□□ 0.72
PVT1-212ENST00000521951 FAM96BQ9Y3D0 163 aa19.53■□□□□ 0.72
PVT1-212ENST00000521951 CENPXA8MT69 81 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 HSD17B6O14756 317 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 REG1BP48304 166 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 IDO2Q6ZQW0 420 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 ZNF833PQ6ZTB9 187 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.52■□□□□ 0.72
PVT1-212ENST00000521951 OR13C8Q8NGS7 320 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 MRGPRFQ96AM1 343 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 S1PR3Q99500 378 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 TBC1D24Q9ULP9 559 aa19.52■□□□□ 0.72
PVT1-212ENST00000521951 FN1P02751 2386 aaKnown RBP19.52■□□□□ 0.72
PVT1-212ENST00000521951 LYRM1O43325 122 aa19.51■□□□□ 0.71
PVT1-212ENST00000521951 SLC22A5O76082 557 aa19.51■□□□□ 0.71
PVT1-212ENST00000521951 IGLV2-14P01704 120 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms