RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MTURNQ8N3F0 131 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 OR1P1Q8NH06 330 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 RNF122Q9H9V4 155 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 RPL36A-HNRNPH2H7BZ11 118 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 IGHV3-13P01766 116 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 IGHV3-7P01780 117 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 HOGA1Q86XE5 327 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 KCNK15Q9H427 330 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 ZMIZ1Q9ULJ6 1067 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 ISLRO14498 428 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 NDUFA2O43678 99 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 NEURL1O76050 574 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 SUCLG1P53597 346 aaKnown RBP14.01□□□□□ -0.17
USP42-207ENST00000521713 TMEM255AQ5JRV8 349 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 C12orf54Q6X4T0 127 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 P2RX4Q99571 388 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 COL25A1Q9BXS0 654 aaPredicted RBP14.01□□□□□ -0.17
USP42-207ENST00000521713 ELOVL5Q9NYP7 299 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 UQCR10Q9UDW1 63 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 VSIG4Q9Y279 399 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 SPINK4O60575 86 aa14□□□□□ -0.17
USP42-207ENST00000521713 ADRA2AP08913 450 aa14□□□□□ -0.17
USP42-207ENST00000521713 SPINK2P20155 84 aa14□□□□□ -0.17
USP42-207ENST00000521713 TNXAQ16473 311 aa14□□□□□ -0.17
USP42-207ENST00000521713 PPYP01298 95 aa14□□□□□ -0.17
USP42-207ENST00000521713 HSD17B10Q99714 261 aaKnown RBP14□□□□□ -0.17
USP42-207ENST00000521713 NCOR1O75376 2440 aa14□□□□□ -0.17
USP42-207ENST00000521713 FAM157AC9JC47 383 aa14□□□□□ -0.17
USP42-207ENST00000521713 RECKO95980 971 aa14□□□□□ -0.17
USP42-207ENST00000521713 NFAM1Q8NET5 270 aaPredicted RBP14□□□□□ -0.17
USP42-207ENST00000521713 R3HDM4Q96D70 268 aa14□□□□□ -0.17
USP42-207ENST00000521713 IGLV3-12A0A075B6K2 115 aa14□□□□□ -0.17
USP42-207ENST00000521713 SNURFLB1AK76 121 aa14□□□□□ -0.17
USP42-207ENST00000521713 CFDP00746 253 aaPredicted RBP14□□□□□ -0.17
USP42-207ENST00000521713 SMIM17P0DL12 118 aa14□□□□□ -0.17
USP42-207ENST00000521713 FSTP19883 344 aa14□□□□□ -0.17
USP42-207ENST00000521713 MARS2Q96GW9 593 aaKnown RBP14□□□□□ -0.17
USP42-207ENST00000521713 IMMP1LQ96LU5 166 aa14□□□□□ -0.17
USP42-207ENST00000521713 AQP10Q96PS8 301 aa14□□□□□ -0.17
USP42-207ENST00000521713 CDC42EP3Q9UKI2 254 aa14□□□□□ -0.17
USP42-207ENST00000521713 WASHC3Q9Y3C0 194 aa14□□□□□ -0.17
USP42-207ENST00000521713 KIR3DL2P43630 455 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 ERVFRD-1P60508 538 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 ZNF880Q6PDB4 577 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 OR52L2PQ8NGH6 319 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 ZNF703Q9H7S9 590 aaPredicted RBP13.99□□□□□ -0.17
USP42-207ENST00000521713 KLHDC2Q9Y2U9 406 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 CHCHD2Q9Y6H1 151 aaPredicted RBP13.99□□□□□ -0.17
USP42-207ENST00000521713 RBM11P57052 281 aaKnown RBP13.99□□□□□ -0.17
USP42-207ENST00000521713 PIGYQ3MUY2 71 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 OR2V2Q96R30 315 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 SF3B6Q9Y3B4 125 aaKnown RBP13.99□□□□□ -0.17
USP42-207ENST00000521713 PSME4Q14997 1843 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 J3QW42 95 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 DCAF12L2Q5VW00 463 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 OR2W1Q9Y3N9 320 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 RALGAPA2Q2PPJ7 1873 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 SPTBP11277 2137 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 CAMPP49913 170 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 RIGQ13278 110 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 C16orf82Q7Z2V1 217 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 FAM219AQ8IW50 185 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 ADAD2Q8NCV1 583 aaKnown RBP13.99□□□□□ -0.17
USP42-207ENST00000521713 FLYWCH2Q96CP2 140 aaKnown RBP13.99□□□□□ -0.17
USP42-207ENST00000521713 TP53RKQ96S44 253 aa13.99□□□□□ -0.17
USP42-207ENST00000521713 OR2T8A6NH00 312 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 CXorf1O96002 111 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 F12P00748 615 aaPredicted RBP13.98□□□□□ -0.17
USP42-207ENST00000521713 WDFY1Q8IWB7 410 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 IGSF23A1L1A6 192 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 TRGC2P03986 189 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 NANOS3P60323 173 aaKnown RBP13.98□□□□□ -0.17
USP42-207ENST00000521713 ZFP36L1Q07352 338 aaKnown RBP13.98□□□□□ -0.17
USP42-207ENST00000521713 OR8G5Q8NG78 346 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 SRXN1Q9BYN0 137 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 LINC00470Q9BZP3 86 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 TLNRD1Q9H1K6 362 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 CORTO00230 105 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 OR2A4O95047 310 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 APCSP02743 223 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 TNFSF10P50591 281 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 OR2A7Q96R45 310 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 IFITM10A6NMD0 228 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 DHRS7CA6NNS2 312 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 SMPD2O60906 423 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 PRNDQ9UKY0 176 aa13.98□□□□□ -0.17
USP42-207ENST00000521713 IGKV1D-42A0A075B6H8 117 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 IGHV3OR15-7A0A075B7D8 119 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 LEMD1Q68G75 181 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 Q6ZT83 130 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 LINC00469Q8N7U9 141 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 CYB561D1Q8N8Q1 229 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 SIGLEC12Q96PQ1 595 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 SPOCK3Q9BQ16 436 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 CACNA1IQ9P0X4 2223 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 OR2J3O76001 311 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 FGF12P61328 243 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 UBE2L3P68036 154 aaKnown RBP13.97□□□□□ -0.17
USP42-207ENST00000521713 ITLN1Q8WWA0 313 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 RGP1Q92546 391 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms