RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 FXYD6Q9H0Q3 95 aa5.89□□□□□ -1.47
CTNNA1-227ENST00000521387 C5orf66Q9H5L9 145 aa5.89□□□□□ -1.47
CTNNA1-227ENST00000521387 SAP30LQ9HAJ7 183 aa5.89□□□□□ -1.47
CTNNA1-227ENST00000521387 EHFQ9NZC4 300 aa5.89□□□□□ -1.47
CTNNA1-227ENST00000521387 IL36GQ9NZH8 169 aa5.89□□□□□ -1.47
CTNNA1-227ENST00000521387 DUX4Q9UBX2 424 aa5.89□□□□□ -1.47
CTNNA1-227ENST00000521387 DNAH6Q9C0G6 4158 aa5.89□□□□□ -1.47
CTNNA1-227ENST00000521387 RPS10-NUDT3A0A1W2PQS6 291 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 DBX1A6NMT0 343 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 LEUTXA8MZ59 168 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 GEMIN2O14893 280 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 ARPC5O15511 151 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 NOS1APO75052 506 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 CST4P01036 141 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 IFNA7P01567 189 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 BCL3P20749 454 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 VAMP1P23763 118 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 S100A11P31949 105 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 RBM11P57052 281 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 GNB2P62879 340 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 SUPT4H1P63272 117 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 PLP2Q04941 152 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 ESCO2Q56NI9 601 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 SLC25A26Q70HW3 274 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 OVCH2Q7RTZ1 564 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 TMEM17Q86X19 198 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 OR8H3Q8N146 312 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 OR10AD1Q8NGE0 317 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 HPSE2Q8WWQ2 592 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 ASB13Q8WXK3 278 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 LINC00476Q8WZB0 136 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 CPNE2Q96FN4 548 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 SCGB3A2Q96PL1 93 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 TECTBQ96PL2 329 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 PHB2Q99623 299 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 CMSS1Q9BQ75 279 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 SERTAD4Q9NUC0 356 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 DECR2Q9NUI1 292 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 PRR13Q9NZ81 148 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 UBQLN2Q9UHD9 624 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 ST3GAL6Q9Y274 331 aa5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 DMBT1Q9UGM3 2413 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-227ENST00000521387 A0A0B4J2A0 478 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 IGHV1-69DA0A0B4J2H0 117 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 A0A1W2PRX2 142 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 CD300LBA8K4G0 201 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 FAM25EA8MYX2 175 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ZNF732B4DXR9 585 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 F8VVB4 439 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 F8VWA3 439 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 PDCD6O75340 191 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 SNAPC5O75971 98 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 IGHV1-69P01742 117 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 IGHV1-46P01743 117 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 FCGR3AP08637 254 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 SLC25A4P12235 298 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 PGAM2P15259 253 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ZNF250P15622 560 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 RPS2P15880 293 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 C4BPBP20851 252 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 DTYMKP23919 212 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 APLNRP35414 380 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 CFHR2P36980 270 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 GPM6AP51674 278 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 GMFBP60983 142 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ERVS71-1P61550 626 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 MALLQ13021 153 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ANKRD55Q3KP44 614 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 CEACAM21Q3KPI0 293 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 TMEM128Q5BJH2 165 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 CLLU1Q5K131 121 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ZNF660Q6AZW8 331 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 LPCAT3Q6P1A2 487 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 TMEM65Q6PI78 240 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 RFPL4BQ6ZWI9 263 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 C5orf24Q7Z6I8 188 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 DPPA2Q7Z7J5 298 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ZNF546Q86UE3 836 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ZDHHC23Q8IYP9 409 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 RPP25LQ8N5L8 163 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 SLAMF9Q96A28 289 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 MRPS24Q96EL2 167 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 PRR25Q96S07 402 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 MICU1Q9BPX6 476 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 PCGF1Q9BSM1 259 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 PAPOLGQ9BWT3 736 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 SSBP3Q9BWW4 388 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 MFFQ9GZY8 342 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ARL6Q9H0F7 186 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 MEGF9Q9H1U4 602 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 OR51B6Q9H340 312 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 PCDHB16Q9NRJ7 776 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 RDH8Q9NYR8 311 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 SHPKQ9UHJ6 478 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 ANXA10Q9UJ72 324 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 TANC2Q9HCD6 1990 aa5.87□□□□□ -1.47
CTNNA1-227ENST00000521387 C13orf42A0A1B0GVH6 325 aa5.86□□□□□ -1.47
CTNNA1-227ENST00000521387 C5orf51A6NDU8 294 aa5.86□□□□□ -1.47
CTNNA1-227ENST00000521387 C22orf46C9J442 243 aa5.86□□□□□ -1.47
CTNNA1-227ENST00000521387 TPD52L2O43399 206 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms