RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 SSX2Q16385 188 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 VAX1Q5SQQ9 334 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 ZNF660Q6AZW8 331 aaPredicted RBP14.06□□□□□ -0.16
TRAM1-203ENST00000520700 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 GDPD1Q8N9F7 314 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.06□□□□□ -0.16
TRAM1-203ENST00000520700 OR5H2Q8NGV7 314 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 ZDHHC16Q969W1 377 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 RPEQ96AT9 228 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 JMJD8Q96S16 334 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 POMT1Q9Y6A1 747 aa14.06□□□□□ -0.16
TRAM1-203ENST00000520700 ZNF736B4DX44 427 aaPredicted RBP14.05□□□□□ -0.16
TRAM1-203ENST00000520700 TXNL1O43396 289 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 TAS2R19P59542 299 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 HABP2Q14520 560 aaPredicted RBP14.05□□□□□ -0.16
TRAM1-203ENST00000520700 ZNF833PQ6ZTB9 187 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 SSMEM1Q8WWF3 244 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 ZNF251Q9BRH9 671 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 THAP7Q9BT49 309 aaPredicted RBP14.05□□□□□ -0.16
TRAM1-203ENST00000520700 SRRQ9GZT4 340 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 DPAGT1Q9H3H5 408 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 OCEL1Q9H607 264 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 HILPDAQ9Y5L2 63 aa14.05□□□□□ -0.16
TRAM1-203ENST00000520700 NF1P21359 2839 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 MDFIC2A0A1B0GVS7 189 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 FAM90A9PA6NNJ1 464 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 HSD17B6O14756 317 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 ST8SIA5O15466 376 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 SLC22A5O76082 557 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 CSF1P09603 554 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 NFYAP23511 347 aaPredicted RBP14.04□□□□□ -0.16
TRAM1-203ENST00000520700 HLA-DMAP28067 261 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 FCGR2CP31995 323 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 HRH1P35367 487 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 RFX2P48378 723 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 ARHGDIBP52566 201 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 MSMO1Q15800 293 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 LRRC75BQ2VPJ9 315 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 PYDC2Q56P42 97 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 THNSL2Q86YJ6 484 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 LYG1Q8N1E2 194 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 Q8N402 240 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 OR5R1Q8NH85 324 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 PIFOQ8TCI5 191 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 RTN4IP1Q8WWV3 396 aaPredicted RBP14.04□□□□□ -0.16
TRAM1-203ENST00000520700 DEDD2Q8WXF8 326 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 TOMM40LQ969M1 308 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 S1PR3Q99500 378 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 AKIP1Q9NQ31 210 aa14.04□□□□□ -0.16
TRAM1-203ENST00000520700 A0A1W2PPI3 338 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 ANKRD20A5PA0PJZ0 165 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 TCF21O43680 179 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 PROP1O75360 226 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 PMP2P02689 132 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 FCER2P06734 321 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 OR8U9P0C7N5 309 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 BRS3P32247 399 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 LUMP51884 338 aaPredicted RBP14.03□□□□□ -0.16
TRAM1-203ENST00000520700 MFSD4AQ8N468 514 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 ZDHHC22Q8N966 263 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 OR8U1Q8NH10 309 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 S100ZQ8WXG8 99 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 SSX3Q99909 188 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 EHFQ9NZC4 300 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 ZNF221Q9UK13 617 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 JMJD1CQ15652 2540 aa14.03□□□□□ -0.16
TRAM1-203ENST00000520700 SAA2-SAA4A0A096LPE2 208 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 IGHV1-3A0A0C4DH29 117 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 PPYP01298 95 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 CD3DP04234 171 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 SAA2P0DJI9 122 aaPredicted RBP14.02□□□□□ -0.17
TRAM1-203ENST00000520700 BAMBIQ13145 260 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 DIAPH2-AS1Q14236 149 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 PLA1AQ53H76 456 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 RNASE12Q5GAN4 147 aaKnown RBP14.02□□□□□ -0.17
TRAM1-203ENST00000520700 RNASE10Q5GAN6 216 aaKnown RBP14.02□□□□□ -0.17
TRAM1-203ENST00000520700 STEAP1BQ6NZ63 245 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 TGIF2LXQ8IUE1 241 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 ARRDC1Q8N5I2 433 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 OR6F1Q8NGZ6 308 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 CFHR4Q92496 578 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 TRIM63Q969Q1 353 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 ABHD14BQ96IU4 210 aa14.02□□□□□ -0.17
TRAM1-203ENST00000520700 HOXA3O43365 443 aaPredicted RBP14.01□□□□□ -0.17
TRAM1-203ENST00000520700 AADACP22760 399 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 CD1BP29016 333 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 GPR12P47775 334 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 EBI3Q14213 229 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 MEF2DQ14814 521 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 SLC9A3R2Q15599 337 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 MOB3AQ96BX8 217 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 SDHCQ99643 169 aaPredicted RBP14.01□□□□□ -0.17
TRAM1-203ENST00000520700 ESM1Q9NQ30 184 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 ABCB10Q9NRK6 738 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 RNF150Q9ULK6 438 aa14.01□□□□□ -0.17
TRAM1-203ENST00000520700 IGKV1D-13A0A0B4J2D9 117 aa14□□□□□ -0.17
TRAM1-203ENST00000520700 RAB3DO95716 219 aa14□□□□□ -0.17
TRAM1-203ENST00000520700 IGHV4-59P01825 116 aa14□□□□□ -0.17
TRAM1-203ENST00000520700 AKAIN1P0CW23 69 aa14□□□□□ -0.17
TRAM1-203ENST00000520700 IGKV1-13P0DP09 117 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms