RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 IGHV3OR16-10A0A075B7F0 116 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 PNMA8CA0A1B0GUJ8 204 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 RNF212BA8MTL3 300 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 ANGPTL7O43827 346 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 GAS8-AS1O95177 125 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 SFTPBP07988 381 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 CALCBP10092 127 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 CELP19835 753 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 VHLP40337 213 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 NPBWR2P48146 333 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 CEBPDP49716 269 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-208ENST00000520228 CAV3P56539 151 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 PPP3R1P63098 170 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 KISS1Q15726 138 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 YIF1BQ5BJH7 314 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 GPR157Q5UAW9 335 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 RNLSQ5VYX0 342 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 SAXO1Q8IYX7 474 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 FAM58AQ8N1B3 248 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 ZSCAN4Q8NAM6 433 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-208ENST00000520228 OR5D18Q8NGL1 313 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 TMEM158Q8WZ71 300 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 EMG1Q92979 244 aaKnown RBP5.5□□□□□ -1.53
SDCBP-208ENST00000520228 RFT1Q96AA3 541 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 CPNE2Q96FN4 548 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-208ENST00000520228 CNBD2Q96M20 576 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 FAM218AQ96MZ4 157 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 SLC6A7Q99884 636 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 CITED2Q99967 270 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-208ENST00000520228 MND1Q9BWT6 205 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 SUCNR1Q9BXA5 334 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 DUSP21Q9H596 190 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 ELL3Q9HB65 397 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-208ENST00000520228 TMEM138Q9NPI0 162 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 RBFOX1Q9NWB1 397 aaKnown RBP5.5□□□□□ -1.53
SDCBP-208ENST00000520228 PAK1IP1Q9NWT1 392 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-208ENST00000520228 TAS2R4Q9NYW5 299 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 CKLFQ9UBR5 152 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 GLS2Q9UI32 602 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 RAB26Q9ULW5 256 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 KPTNQ9Y664 436 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 MALRD1Q5VYJ5 2156 aa5.5□□□□□ -1.53
SDCBP-208ENST00000520228 TRAV40A0A0B4J280 105 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 IGKV1-12A0A0C4DH73 117 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 K7N7A8 449 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 SH2D1BO14796 132 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 HAND1O96004 215 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 IGKV1D-12P01611 117 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 ALDOBP05062 364 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 PRKACAP17612 351 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 RPL35AP18077 110 aaKnown RBP5.49□□□□□ -1.53
SDCBP-208ENST00000520228 BCL3P20749 454 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 GABRR1P24046 479 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 CRHBPP24387 322 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 BPIFB3P59826 476 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 RPS11P62280 158 aaKnown RBP eCLIP5.49□□□□□ -1.53
SDCBP-208ENST00000520228 RPL31P62899 125 aaKnown RBP5.49□□□□□ -1.53
SDCBP-208ENST00000520228 SLC35A2P78381 396 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 BDH1Q02338 343 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 SPHARQ15513 63 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 Q499Y3 187 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 GPR141Q7Z602 305 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 OR8H3Q8N146 312 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 KIR3DL3Q8N743 410 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 ASCC1Q8N9N2 400 aaKnown RBP5.49□□□□□ -1.53
SDCBP-208ENST00000520228 OR4M1Q8NGD0 313 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 OR51A2Q8NGJ7 313 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 OR13C5Q8NGS8 318 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 C8orf46Q8TAG6 207 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 TNFAIP8L1Q8WVP5 186 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF486Q96H40 463 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-208ENST00000520228 PGLYRP3Q96LB9 341 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 OR5M11Q96RB7 305 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 TBX15Q96SF7 602 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 GPER1Q99527 375 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 CCDC90BQ9GZT6 254 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 GFRA4Q9GZZ7 299 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 SIRPDQ9H106 197 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 Q9H521 79 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 RHOFQ9HBH0 211 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 HMG20AQ9NP66 347 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 C19orf12Q9NSK7 152 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 RRP15Q9Y3B9 282 aaKnown RBP5.49□□□□□ -1.53
SDCBP-208ENST00000520228 DYSFO75923 2080 aa5.49□□□□□ -1.53
SDCBP-208ENST00000520228 IGHV1-69DA0A0B4J2H0 117 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 CENPVL3A0A0U1RRI6 287 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 PRSS46E5RG02 174 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 M0R1W7 72 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF737O75373 536 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 GPX5O75715 221 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 VENTXO95231 258 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 IGHV1-69P01742 117 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 HSMCR30P0CW71 290 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 IGFBP3P17936 291 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 MAPK3P27361 379 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF93P35789 620 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 TGFBR2P37173 567 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 PTGFRP43088 359 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 LUMP51884 338 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 SNU13P55769 128 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms