RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 MED20Q9H944 212 aa4.6□□□□□ -1.67
CTNNA1-216ENST00000519489 KRT84Q9NSB2 600 aa4.6□□□□□ -1.67
CTNNA1-216ENST00000519489 C11orf21Q9P2W6 132 aa4.6□□□□□ -1.67
CTNNA1-216ENST00000519489 TBC1D24Q9ULP9 559 aa4.6□□□□□ -1.67
CTNNA1-216ENST00000519489 IGHV3-35A0A0C4DH35 117 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 IDH3BO43837 385 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 SELENOFO60613 162 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 SRSF10O75494 262 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 FADS2O95864 444 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 CSTBP04080 98 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 CTSDP07339 412 aaPredicted RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 CT45A6P0DMU7 189 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 CT45A5P0DMU8 189 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 CT45A7P0DMV0 189 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 MAS1LP35410 378 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 SLC1A6P48664 564 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 GNMTQ14749 295 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 USF2Q15853 346 aaPredicted RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 SLC22A6Q4U2R8 563 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 LEMD1Q68G75 181 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 ZNF833PQ6ZTB9 187 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 SSX7Q7RTT5 188 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 Q8IYB0 196 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 LILRB2Q8N423 598 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 FAM24BQ8N5W8 94 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 EIF1ADQ8N9N8 165 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 OR8D4Q8NGM9 314 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 OTOSQ8NHW6 89 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 GHSRQ92847 366 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 RFT1Q96AA3 541 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 TPD52L3Q96J77 140 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 INTS14Q96SY0 518 aa4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 C6orf62Q9GZU0 229 aaPredicted RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 RCC2Q9P258 522 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-216ENST00000519489 A0A0U1RQV1 116 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 TMEM269A0A1B0GVZ9 245 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 OR4C46A6NHA9 309 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 H0YJX3 145 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 H3BNX3 289 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 DYNC1I1O14576 645 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 OR2J3O76001 311 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 KRT36O76013 467 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 KDM4BO94953 1096 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 CYB5AP00167 134 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 TFPI2P48307 235 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 FUT6P51993 359 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 EMP1P54849 157 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 PAX5Q02548 391 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 PAN3Q58A45 887 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 CLEC19AQ6UXS0 136 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 GSG1LQ6UXU4 331 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 CHST4Q8NCG5 386 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 THEM6Q8WUY1 208 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 CCDC107Q8WV48 283 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 UHRF2Q96PU4 802 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 CGREF1Q99674 301 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 GORASP2Q9H8Y8 452 aa4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 MRPL27Q9P0M9 148 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 NUFIP1Q9UHK0 495 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-216ENST00000519489 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 FAM223BA6NKX1 122 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 H0YJW9 148 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 UBDO15205 165 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 SEMG1P04279 462 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 IGKV1-16P04430 117 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 CRYGBP07316 175 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 LYNP07948 512 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 SPART-AS1P0CW21 52 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 T-ENOLP0DO92 83 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 H2AFXP16104 143 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 ARL3P36405 182 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 LGALS7P47929 136 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 GNG11P61952 73 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 PDZK1IP1Q13113 114 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 C15orf32Q32M92 178 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 Q3ZCU0 254 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 FAM106AQ4KMX7 169 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 TTC32Q5I0X7 151 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 TRMT10CQ7L0Y3 403 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 TRPT1Q86TN4 253 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 FAM223AQ8IWN6 122 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 MARC2Q969Z3 335 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 ZNF414Q96IQ9 312 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 ETV7Q9Y603 341 aa4.57□□□□□ -1.68
CTNNA1-216ENST00000519489 SAA2-SAA4A0A096LPE2 208 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 RPS10-NUDT3A0A1W2PQS6 291 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 A0A1W2PRQ8 180 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 ACOD1A6NK06 481 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 MAGEB4O15481 346 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 TUSC2O75896 110 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 NUDT3O95989 172 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 OR9G9P0C7N8 305 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 SAA2P0DJI9 122 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 KITP10721 976 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 RPA2P15927 270 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 KDELR2P33947 212 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 MRPL19P49406 292 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 SELENOWP63302 87 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 ALKBH1Q13686 389 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms