RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PATZ1Q9HBE1 687 aaKnown RBP2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 RHOFQ9HBH0 211 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 GCM1Q9NP62 436 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 ZC4H2Q9NQZ6 224 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 GSN-AS1Q9NRJ2 163 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 TPSG1Q9NRR2 321 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 DECR2Q9NUI1 292 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 MYEF2Q9P2K5 600 aaKnown RBP2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 PFDN2Q9UHV9 154 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 MRM2Q9UI43 246 aaKnown RBP2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 MRPS7Q9Y2R9 242 aaKnown RBP2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM96BQ9Y3D0 163 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 LRP12Q9Y561 859 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 SESN1Q9Y6P5 492 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 R4GMQ9 66 aa2.44□□□□□ -2.02
SCARNA13-201ENST00000516672 FXYD6-FXYD2A0A087WZ82 144 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 TRBV5-7A0A0A0MS05 114 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 TMEM218A2RU14 115 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 RAB19A4D1S5 217 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 GGT3PA6NGU5 568 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR5B21A6NL26 309 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 RFPL4AA6NLU0 287 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR4C45A6NMZ5 311 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 IFITM5A6NNB3 132 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 COLCA2A8K830 154 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 F5H0A9 414 aaPredicted RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 F5H5P2 479 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 RFPL4AL1F8VTS6 287 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 F8VVB4 439 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 F8VWA3 439 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 H3BSH0 61 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 P2RY10O00398 339 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ARPC5O15511 151 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 BCL2L11O43521 198 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 SULT1B1O43704 296 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 CREBL2O60519 120 aaPredicted RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 EIF3GO75821 320 aaKnown RBP eCLIP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 GATBO75879 557 aaKnown RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 DHRS3O75911 302 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 SNAPC5O75971 98 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ATG12O94817 140 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 KDM4BO94953 1096 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ECDO95905 644 aaPredicted RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 IGHV2-70P01814 119 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 APOC3P02656 99 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 TTRP02766 147 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ANXA2P07355 339 aaKnown RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 FBP1P09467 338 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ZNF735P0CB33 412 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 SPP1P10451 314 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 PTHLHP12272 177 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 MUC1P15941 1255 aaPredicted RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 MGMTP16455 207 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 CDK2P24941 298 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 PAX6P26367 422 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 GNALP38405 381 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 MPV17P39210 176 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 NAA10P41227 235 aaPredicted RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 RPS27P42677 84 aaKnown RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 HAAOP46952 286 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 NPBWR1P48145 328 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 KCNJ3P48549 501 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 HCCSP53701 268 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 TAS2R20P59543 309 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 UBE2MP61081 183 aaKnown RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ERVS71-1P61550 626 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 CCL8P80075 99 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 TNFAIP6P98066 277 aaPredicted RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 PITPNAQ00169 270 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ZNF345Q14585 488 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR8G1Q15617 311 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 LY6EQ16553 131 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 SNAI3Q3KNW1 292 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 TMEM155Q4W5P6 130 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ACSM3Q53FZ2 586 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 GLYATL3Q5SZD4 288 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 SPATA46Q5T0L3 261 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 SFRP4Q6FHJ7 346 aaPredicted RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR2T2Q6IF00 324 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 RPL22L1Q6P5R6 122 aaKnown RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 UQCC3Q6UW78 93 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 Q6ZR03 302 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 Q6ZRM9 215 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM57BQ71RH2 274 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM220AQ7Z4H9 259 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 LRRTM1Q86UE6 522 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 NAA40Q86UY6 237 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 CATSPERDQ86XM0 798 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM90A1Q86YD7 464 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 CBLN2Q8IUK8 224 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 SERPINA12Q8IW75 414 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR2Z1Q8NG97 314 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR1M1Q8NGA1 313 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR10H4Q8NGA5 316 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR4D10Q8NGI6 311 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR5D14Q8NGL3 314 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR4C16Q8NGL9 310 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR5M8Q8NGP6 311 aa2.43□□□□□ -2.02
SCARNA13-201ENST00000516672 OR1S2Q8NGQ3 325 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms