RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 A0A1W2PRM7 423 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 LEUTXA8MZ59 168 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 DISC1C4P0D8 188 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 LY6LH3BQJ8 138 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 ST8SIA5O15466 376 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 OR8U9P0C7N5 309 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 ZNF735P0CB33 412 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 IL3RAP26951 378 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 LUMP51884 338 aaPredicted RBP17.02■□□□□ 0.32
LSM6-207ENST00000515311 HERV-K104P61576 105 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 FAAP20Q6NZ36 180 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 IL17RELQ6ZVW7 336 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 OR8U1Q8NH10 309 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 OR56B4Q8NH76 319 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 MOB3AQ96BX8 217 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 C7orf50Q9BRJ6 194 aaKnown RBP17.02■□□□□ 0.32
LSM6-207ENST00000515311 HRASLSQ9HDD0 168 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 SLC2A8Q9NY64 477 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 PIPOXQ9P0Z9 390 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 DPM3Q9P2X0 92 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 SVEP1Q4LDE5 3571 aa17.02■□□□□ 0.31
LSM6-207ENST00000515311 RAB29O14966 203 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 EPHA1P21709 976 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 LDLRAD2Q5SZI1 272 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 Q71RC1 249 aaPredicted RBP17.01■□□□□ 0.31
LSM6-207ENST00000515311 LHFPL1Q86WI0 220 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 ODF3L1Q8IXM7 274 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 LYG1Q8N1E2 194 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.01■□□□□ 0.31
LSM6-207ENST00000515311 ST6GALNAC6Q969X2 333 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 MALSU1Q96EH3 234 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 AJUBAQ96IF1 538 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 PRRT1Q99946 306 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 BEX2Q9BXY8 128 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 MS4A7Q9GZW8 240 aaPredicted RBP17.01■□□□□ 0.31
LSM6-207ENST00000515311 ABCB10Q9NRK6 738 aa17.01■□□□□ 0.31
LSM6-207ENST00000515311 RBM7Q9Y580 266 aaKnown RBP17.01■□□□□ 0.31
LSM6-207ENST00000515311 IGKV1D-13A0A0B4J2D9 117 aa17■□□□□ 0.31
LSM6-207ENST00000515311 NAP1L6A6NFF2 107 aa17■□□□□ 0.31
LSM6-207ENST00000515311 OOSP1A8MZH6 123 aa17■□□□□ 0.31
LSM6-207ENST00000515311 SLC22A5O76082 557 aa17■□□□□ 0.31
LSM6-207ENST00000515311 IGKV1-13P0DP09 117 aa17■□□□□ 0.31
LSM6-207ENST00000515311 SCGB2A2Q13296 93 aa17■□□□□ 0.31
LSM6-207ENST00000515311 MSMO1Q15800 293 aa17■□□□□ 0.31
LSM6-207ENST00000515311 AADACL3Q5VUY0 350 aa17■□□□□ 0.31
LSM6-207ENST00000515311 FAM71F2Q6NXP2 309 aa17■□□□□ 0.31
LSM6-207ENST00000515311 LHFPL4Q7Z7J7 247 aa17■□□□□ 0.31
LSM6-207ENST00000515311 LDLRAD3Q86YD5 345 aa17■□□□□ 0.31
LSM6-207ENST00000515311 TERB2Q8NHR7 220 aa17■□□□□ 0.31
LSM6-207ENST00000515311 BORCS5Q969J3 196 aa17■□□□□ 0.31
LSM6-207ENST00000515311 ABHD14BQ96IU4 210 aa17■□□□□ 0.31
LSM6-207ENST00000515311 OR2D2Q9H210 308 aa17■□□□□ 0.31
LSM6-207ENST00000515311 MCUBQ9NWR8 336 aa17■□□□□ 0.31
LSM6-207ENST00000515311 ZNF221Q9UK13 617 aa17■□□□□ 0.31
LSM6-207ENST00000515311 GAB2Q9UQC2 676 aa17■□□□□ 0.31
LSM6-207ENST00000515311 MTORP42345 2549 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 SAA2-SAA4A0A096LPE2 208 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 CENPXA8MT69 81 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 SAA2P0DJI9 122 aaPredicted RBP16.99■□□□□ 0.31
LSM6-207ENST00000515311 GPR12P47775 334 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 TPTE2P1Q5T6R2 138 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 ZNF833PQ6ZTB9 187 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 ZNF645Q8N7E2 425 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 OR51S1Q8NGJ8 323 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 FXYD6Q9H0Q3 95 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 SCP2D1Q9UJQ7 156 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 RNF150Q9ULK6 438 aa16.99■□□□□ 0.31
LSM6-207ENST00000515311 A0A0U1RQK1 487 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 OR5H14A6NHG9 310 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 INAFM1C9JVW0 142 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 TXNL1O43396 289 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 UCP3P55916 312 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 FXYD4P59646 89 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 SCGB2B2Q4G0G5 96 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 TOMM40LQ969M1 308 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 RPEQ96AT9 228 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 S1PR3Q99500 378 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 ZNF251Q9BRH9 671 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 SLC5A7Q9GZV3 580 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 FAM96BQ9Y3D0 163 aa16.98■□□□□ 0.31
LSM6-207ENST00000515311 LINC00854A0A1B0GVQ3 168 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 HSD17B6O14756 317 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 PLA2G10O15496 165 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 FBP1P09467 338 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 SRD5A1P18405 259 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 ECI1P42126 302 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 ZNF816Q0VGE8 651 aaPredicted RBP16.97■□□□□ 0.31
LSM6-207ENST00000515311 SSX2Q16385 188 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 TUSC1Q2TAM9 212 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 CCDC144NLQ6NUI1 221 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 LPCAT3Q6P1A2 487 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 SECTM1Q8WVN6 248 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 C17orf50Q8WW18 174 aa16.97■□□□□ 0.31
LSM6-207ENST00000515311 RTN4IP1Q8WWV3 396 aaPredicted RBP16.97■□□□□ 0.31
LSM6-207ENST00000515311 IGLV2-14P01704 120 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 GAPDHP04406 335 aaKnown RBP16.96■□□□□ 0.31
LSM6-207ENST00000515311 IFITM3Q01628 133 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 ASAH1Q13510 395 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 PLA1AQ53H76 456 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 IDO2Q6ZQW0 420 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms