RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 CXorf58Q96LI9 332 aa12.4□□□□□ -0.42
TRIO-222ENST00000515144 ATP5SQ99766 215 aa12.4□□□□□ -0.42
TRIO-222ENST00000515144 C7orf69Q9H7B7 122 aa12.4□□□□□ -0.42
TRIO-222ENST00000515144 KIAA1324LA8MWY0 1029 aaPredicted RBP12.4□□□□□ -0.43
TRIO-222ENST00000515144 TRIM77I1YAP6 450 aa12.4□□□□□ -0.43
TRIO-222ENST00000515144 UBE2L6O14933 153 aa12.4□□□□□ -0.43
TRIO-222ENST00000515144 BCL2L11O43521 198 aa12.4□□□□□ -0.43
TRIO-222ENST00000515144 PRSS3P2Q8NHM4 247 aa12.4□□□□□ -0.43
TRIO-222ENST00000515144 SRD5A3Q9H8P0 318 aa12.4□□□□□ -0.43
TRIO-222ENST00000515144 SELENOKQ9Y6D0 94 aa12.4□□□□□ -0.43
TRIO-222ENST00000515144 IGHV3OR16-13A0A075B7E8 117 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 IGHV3-74A0A0B4J1X5 117 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 LYNX1G3V0Z9 82 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 NDUFB6O95139 128 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 LYNX1P0DP58 116 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 TMEM140Q9NV12 185 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 RCC1P18754 421 aaPredicted RBP12.39□□□□□ -0.43
TRIO-222ENST00000515144 FAM216AQ8WUB2 273 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 BTF3L4Q96K17 158 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 hCG_38984A0A1B0GV85 526 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 OGG1O15527 345 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 EMP1P54849 157 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 FUT5Q11128 374 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 TBR1Q16650 682 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 NSUN5P1Q3KNT7 163 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 DMKNQ6E0U4 476 aaPredicted RBP12.39□□□□□ -0.43
TRIO-222ENST00000515144 FAM57AQ8TBR7 257 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 FDX2Q6P4F2 183 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 NUP210Q8TEM1 1887 aaPredicted RBP12.39□□□□□ -0.43
TRIO-222ENST00000515144 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 CD81P60033 236 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 SLC25A42Q86VD7 318 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 PRSS27Q9BQR3 290 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 RHOFQ9HBH0 211 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 ELOVL5Q9NYP7 299 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 ZNF629Q9UEG4 869 aaPredicted RBP12.39□□□□□ -0.43
TRIO-222ENST00000515144 PRNDQ9UKY0 176 aa12.39□□□□□ -0.43
TRIO-222ENST00000515144 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 LIPFP07098 398 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 NAT8BQ9UHF3 227 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 B9A039 149 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 CD59P13987 128 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 FCGR2BP31994 310 aaPredicted RBP12.38□□□□□ -0.43
TRIO-222ENST00000515144 CRYBA2P53672 197 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 TMEM50BP56557 158 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 TWIST1Q15672 202 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 OIT3Q8WWZ8 545 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 CALYQ9NYX4 217 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 MMP24Q9Y5R2 645 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 FOXH1O75593 365 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 CD1BP29016 333 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 ZP4Q12836 540 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 AMELYQ99218 206 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 NPAS1Q99742 590 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 ZNF703Q9H7S9 590 aaPredicted RBP12.38□□□□□ -0.43
TRIO-222ENST00000515144 Q71RC1 249 aaPredicted RBP12.38□□□□□ -0.43
TRIO-222ENST00000515144 C9orf106Q8NAJ2 232 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 SNCGO76070 127 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 Q6ZT83 130 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 ZNF561Q8N587 486 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 RPS4Y2Q8TD47 263 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 LHFPL6Q9Y693 200 aa12.38□□□□□ -0.43
TRIO-222ENST00000515144 SYNGR2O43760 224 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 CXorf66Q5JRM2 361 aaPredicted RBP12.37□□□□□ -0.43
TRIO-222ENST00000515144 SEZ6L2Q6UXD5 910 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 UMODP07911 640 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 LINC00596Q86U02 117 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 NTNG2Q96CW9 530 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 OR4C12Q96R67 309 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 MRPL37Q9BZE1 423 aaKnown RBP12.37□□□□□ -0.43
TRIO-222ENST00000515144 IDI2-AS1Q9NZ38 188 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 FBXL17Q9UF56 701 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 OR4C45A6NMZ5 311 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
TRIO-222ENST00000515144 SFTA3P0C7M3 94 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 FGF12P61328 243 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 PPP1R2P9O14990 202 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 ZNF883P0CG24 379 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 SCGB1C2P0DMR2 95 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 CPN1P15169 458 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 SLC6A1P30531 599 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 SNX22Q96L94 193 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 MESP1Q9BRJ9 268 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 CHCHD2Q9Y6H1 151 aaPredicted RBP12.37□□□□□ -0.43
TRIO-222ENST00000515144 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
TRIO-222ENST00000515144 CD24P25063 80 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 COL8A1P27658 744 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 ZNF645Q8N7E2 425 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 SSTR5P35346 364 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 CLEC18BQ6UXF7 455 aa12.37□□□□□ -0.43
TRIO-222ENST00000515144 IGHV1-2P23083 117 aa12.36□□□□□ -0.43
TRIO-222ENST00000515144 GLIPR1P48060 266 aa12.36□□□□□ -0.43
TRIO-222ENST00000515144 ANGPTL6Q8NI99 470 aa12.36□□□□□ -0.43
TRIO-222ENST00000515144 SLIRPQ9GZT3 109 aaKnown RBP12.36□□□□□ -0.43
TRIO-222ENST00000515144 KIR3DL2P43630 455 aa12.36□□□□□ -0.43
TRIO-222ENST00000515144 RPEL1Q2QD12 228 aa12.36□□□□□ -0.43
TRIO-222ENST00000515144 PITPNC1Q9UKF7 332 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms