RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 SURF2Q15527 256 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 LTC4SQ16873 150 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 PLA1AQ53H76 456 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 AADACL3Q5VUY0 350 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 ZNF57Q68EA5 555 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 FAM53AQ6NSI3 398 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 OR10V1Q8NGI7 309 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 TERB2Q8NHR7 220 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 PARP12Q9H0J9 701 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 IFI27L2Q9H2X8 130 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 YAE1D1Q9NRH1 226 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 PIPOXQ9P0Z9 390 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 SCP2D1Q9UJQ7 156 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 NUP50Q9UKX7 468 aa9.73□□□□□ -0.85
PDLIM5-220ENST00000514830 SONP18583 2426 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 CENPXA8MT69 81 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 RAB29O14966 203 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 NPFFO15130 113 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 SLC31A2O15432 143 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 IGHV4-38-2P0DP08 117 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 HNF1AP20823 631 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 AADACP22760 399 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 COX7A1P24310 79 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 IL3RAP26951 378 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 HTR1DP28221 377 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 CEACAM3P40198 252 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 DLX1P56177 255 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 IFITM3Q01628 133 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 FAM120AOSQ5T036 256 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 LPCAT3Q6P1A2 487 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 LDLRAD3Q86YD5 345 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 ODF3L1Q8IXM7 274 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 OR56B4Q8NH76 319 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 LEAP2Q969E1 77 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 MALSU1Q96EH3 234 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 AJUBAQ96IF1 538 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 ZNF2Q9BSG1 426 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 ABCB10Q9NRK6 738 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 DPM3Q9P2X0 92 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 TBC1D24Q9ULP9 559 aa9.72□□□□□ -0.85
PDLIM5-220ENST00000514830 FAM172BPA6NC97 362 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 OR5H14A6NHG9 310 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 LEUTXA8MZ59 168 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 LYRM1O43325 122 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 TXNL1O43396 289 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 ARG1P05089 322 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 SAA4P35542 130 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 GNG10P50151 68 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 HERV-K104P61576 105 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNF816Q0VGE8 651 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNF833PQ6ZTB9 187 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNF645Q8N7E2 425 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 ZBTB34Q8NCN2 500 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 OR51S1Q8NGJ8 323 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 OR10X1Q8NGY0 326 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 MRGPRFQ96AM1 343 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNF486Q96H40 463 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 AKR1E2Q96JD6 320 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 SMR3AQ99954 134 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 SLC25A21Q9BQT8 299 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNF251Q9BRH9 671 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 PRDM13Q9H4Q3 707 aa9.71□□□□□ -0.86
PDLIM5-220ENST00000514830 SAA2-SAA4A0A096LPE2 208 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 IGKV1D-13A0A0B4J2D9 117 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 ST8SIA5O15466 376 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 IGLV2-14P01704 120 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 OR8U9P0C7N5 309 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 SAA2P0DJI9 122 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 IGKV1-13P0DP09 117 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 SLC6A1P30531 599 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 BTCP35070 178 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 LGALS4P56470 323 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 SCGB2A2Q13296 93 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 EIF4EBP1Q13541 118 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 DCTN2Q13561 401 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 HABP2Q14520 560 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 AANATQ16613 207 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 LDLRAD2Q5SZI1 272 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 CCDC144NLQ6NUI1 221 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 FAAP20Q6NZ36 180 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 SLC38A6Q8IZM9 456 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 BVESQ8NE79 360 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 OR13C8Q8NGS7 320 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 OR8U1Q8NH10 309 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 SCGB3A2Q96PL1 93 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 S1PR3Q99500 378 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 RSRP1Q9BUV0 290 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 FXYD6Q9H0Q3 95 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 MEGF9Q9H1U4 602 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 OR2D2Q9H210 308 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNF221Q9UK13 617 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 CDC42EP3Q9UKI2 254 aa9.7□□□□□ -0.86
PDLIM5-220ENST00000514830 A0A1W2PPE3 182 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 VGLL3A8MV65 326 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 COL6A5A8TX70 2615 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 PROP1O75360 226 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 IGHV3-7P01780 117 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 GAPDHP04406 335 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 EPHA1P21709 976 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 GNRHRP30968 328 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms