RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 TMBIM1Q969X1 311 aa3.75□□□□□ -1.81
NUP54-215ENST00000514313 PKMYT1Q99640 499 aa3.75□□□□□ -1.81
NUP54-215ENST00000514313 C1QTNF6Q9BXI9 259 aa3.75□□□□□ -1.81
NUP54-215ENST00000514313 ZNF391Q9UJN7 358 aa3.75□□□□□ -1.81
NUP54-215ENST00000514313 SPATA31E1Q6ZUB1 1445 aa3.75□□□□□ -1.81
NUP54-215ENST00000514313 ABCC11Q96J66 1382 aa3.75□□□□□ -1.81
NUP54-215ENST00000514313 MYO3BQ8WXR4 1341 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 IGSF23A1L1A6 192 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 C21orf140B9A014 251 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 CRTAPO75718 401 aaPredicted RBP3.74□□□□□ -1.81
NUP54-215ENST00000514313 OR4A8P0C604 315 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 DAPP51397 102 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 MAGOHP61326 146 aaKnown RBP3.74□□□□□ -1.81
NUP54-215ENST00000514313 SPIN4Q56A73 249 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 ACSBG2Q5FVE4 666 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 OGFRL1Q5TC84 451 aaPredicted RBP3.74□□□□□ -1.81
NUP54-215ENST00000514313 TNFAIP8L2Q6P589 184 aaPredicted RBP3.74□□□□□ -1.81
NUP54-215ENST00000514313 LRRN1Q6UXK5 716 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 OR5P3Q8WZ94 311 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 RAD51AP1Q96B01 352 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 TVP23CQ96ET8 276 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 OR8B2Q96RD0 313 aa3.74□□□□□ -1.81
NUP54-215ENST00000514313 TRAV8-1A0A0A6YYK1 113 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 RPS12P25398 132 aaKnown RBP3.73□□□□□ -1.81
NUP54-215ENST00000514313 AKR1C2P52895 323 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 COMMD7Q86VX2 200 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 ZNF567Q8N184 647 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 LY6G5BQ8NDX9 201 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 CCDC112Q8NEF3 446 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 MFSD8Q8NHS3 518 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 Q8WTZ3 238 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 EEF1AKMT1Q8WVE0 214 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 RAB8BQ92930 207 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 TESCQ96BS2 214 aa3.73□□□□□ -1.81
NUP54-215ENST00000514313 RPL12P30050 165 aaKnown RBP3.72□□□□□ -1.81
NUP54-215ENST00000514313 OPRM1P35372 400 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 FGF12P61328 243 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 SLC35A2P78381 396 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 FABP5Q01469 135 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 GNA13Q14344 377 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 JOSD1Q15040 202 aaPredicted RBP3.72□□□□□ -1.81
NUP54-215ENST00000514313 SPIN3Q5JUX0 258 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 LMX1AQ8TE12 382 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 PTH2Q96A98 100 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 OR52B2Q96RD2 323 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 HIGD2AQ9BW72 106 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 BABAM2Q9NXR7 383 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 VPREB3Q9UKI3 123 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 MAP3K5Q99683 1374 aa3.72□□□□□ -1.81
NUP54-215ENST00000514313 LINC00862A6NCI5 91 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 A8MWP6 167 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 AHSA1O95433 338 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 REG1AP05451 166 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 CRYGDP07320 174 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 IGHV3-30-3P0DP02 117 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 CD36P16671 472 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 OR10J1P30954 320 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 MRPL51Q4U2R6 128 aaKnown RBP3.71□□□□□ -1.82
NUP54-215ENST00000514313 DKKL1Q9UK85 242 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 ALG5Q9Y673 324 aa3.71□□□□□ -1.82
NUP54-215ENST00000514313 LOC102725191A0A1B0GVB3 256 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 C5orf49A4QMS7 147 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 TGOLN2O43493 480 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 PSCAO43653 123 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 IL3P08700 152 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 P0C880 135 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 ANP32AP39687 249 aaKnown RBP3.7□□□□□ -1.82
NUP54-215ENST00000514313 CA7P43166 264 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 RPS24P62847 133 aaKnown RBP3.7□□□□□ -1.82
NUP54-215ENST00000514313 EBPQ15125 230 aaKnown RBP3.7□□□□□ -1.82
NUP54-215ENST00000514313 CST6Q15828 149 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 MSRB3Q8IXL7 192 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 C10orf67Q8IYJ2 551 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 DNAAF3Q8N9W5 541 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 TMEM161BQ8NDZ6 487 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 OR10P1Q8NGE3 313 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 OR10D4PQ8NGN7 298 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 CMTM2Q8TAZ6 248 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 POLR1DQ9Y2S0 133 aa3.7□□□□□ -1.82
NUP54-215ENST00000514313 NQO1P15559 274 aaKnown RBP3.69□□□□□ -1.82
NUP54-215ENST00000514313 HLA-DRB3P79483 266 aa3.69□□□□□ -1.82
NUP54-215ENST00000514313 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
NUP54-215ENST00000514313 N4BP2L1Q5TBK1 243 aaPredicted RBP3.69□□□□□ -1.82
NUP54-215ENST00000514313 SDIM1Q6ZPB5 146 aa3.69□□□□□ -1.82
NUP54-215ENST00000514313 RASSF6Q6ZTQ3 369 aa3.69□□□□□ -1.82
NUP54-215ENST00000514313 OR8J2Q8NGG1 315 aa3.69□□□□□ -1.82
NUP54-215ENST00000514313 TBX5Q99593 518 aa3.69□□□□□ -1.82
NUP54-215ENST00000514313 HES4Q9HCC6 221 aa3.69□□□□□ -1.82
NUP54-215ENST00000514313 PCYT1BQ9Y5K3 369 aaPredicted RBP3.69□□□□□ -1.82
NUP54-215ENST00000514313 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 M0R381 172 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 IFNA5P01569 189 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 ISG15P05161 165 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 CTBP2P56545 445 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 SNAP25P60880 206 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 CD200R1LQ6Q8B3 271 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 C1orf174Q8IYL3 243 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 TMEM109Q9BVC6 243 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 PLCH2O75038 1416 aa3.68□□□□□ -1.82
NUP54-215ENST00000514313 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms