RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CD99P14209 185 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 SLC6A1P30531 599 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 ECI1P42126 302 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 CCR6P51684 374 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 FXYD4P59646 89 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 HLA-DRB5Q30154 266 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 ODF3L1Q8IXM7 274 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 PDZD9Q8IXQ8 264 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 SLC25A21Q9BQT8 299 aaPredicted RBP10.19□□□□□ -0.78
PDPN-210ENST00000513143 GHITMQ9H3K2 345 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 ZNRD1Q9P1U0 126 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 GAB2Q9UQC2 676 aa10.19□□□□□ -0.78
PDPN-210ENST00000513143 RBM7Q9Y580 266 aaKnown RBP10.19□□□□□ -0.78
PDPN-210ENST00000513143 IGHV1-69DA0A0B4J2H0 117 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 BUB1B-PAK6H3BSN5 160 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 SLC22A5O76082 557 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 NDUFB6O95139 128 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 IGLV2-14P01704 120 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 IGHV1-69P01742 117 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 ARG1P05089 322 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 ZNF137PP52743 207 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 RBMS2Q15434 407 aaKnown RBP10.18□□□□□ -0.78
PDPN-210ENST00000513143 SURF2Q15527 256 aaPredicted RBP10.18□□□□□ -0.78
PDPN-210ENST00000513143 PLA1AQ53H76 456 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 KLF17Q5JT82 389 aaPredicted RBP10.18□□□□□ -0.78
PDPN-210ENST00000513143 LPCAT3Q6P1A2 487 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 LYG1Q8N1E2 194 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 OR4P4Q8NGL7 312 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 OR10X1Q8NGY0 326 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 MARCH1Q8TCQ1 289 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 SECTM1Q8WVN6 248 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 TOMM40LQ969M1 308 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 ABHD14BQ96IU4 210 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 SLC5A7Q9GZV3 580 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 OR2D2Q9H210 308 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 DPAGT1Q9H3H5 408 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 PIPOXQ9P0Z9 390 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 RNF150Q9ULK6 438 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 GPR132Q9UNW8 380 aa10.18□□□□□ -0.78
PDPN-210ENST00000513143 TRAV40A0A0B4J280 105 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 FAM240BA0A1B0GVZ2 78 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 RAB29O14966 203 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 FSHBP01225 129 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 IGHV4-38-2P0DP08 117 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 GNRHRP30968 328 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 MSMO1Q15800 293 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 MIDNQ504T8 468 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 GPR157Q5UAW9 335 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 NRARPQ7Z6K4 114 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 SLC38A6Q8IZM9 456 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 DRAM1Q8N682 238 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 ZNF645Q8N7E2 425 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 ZDHHC22Q8N966 263 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.17□□□□□ -0.78
PDPN-210ENST00000513143 DUSP18Q8NEJ0 188 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 ZFAND1Q8TCF1 268 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 ST6GALNAC6Q969X2 333 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 CREB3L1Q96BA8 519 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 SMR3AQ99954 134 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 ZNF251Q9BRH9 671 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 RSRP1Q9BUV0 290 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 CCL28Q9NRJ3 127 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 COPZ2Q9P299 210 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 ZNF221Q9UK13 617 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 TBL2Q9Y4P3 447 aaKnown RBP10.17□□□□□ -0.78
PDPN-210ENST00000513143 AMMECR1Q9Y4X0 333 aaPredicted RBP10.17□□□□□ -0.78
PDPN-210ENST00000513143 HIVEP1P15822 2718 aa10.17□□□□□ -0.78
PDPN-210ENST00000513143 SAA2-SAA4A0A096LPE2 208 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 A0A1W2PRD5 423 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 A0A1W2PRF3 423 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 A0A1W2PRM7 423 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 A8MV72 311 aaPredicted RBP10.16□□□□□ -0.78
PDPN-210ENST00000513143 LY6LH3BQJ8 138 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 NPFFO15130 113 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 PROP1O75360 226 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 LY6G6DO95868 133 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 PTTG1O95997 202 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 TCRBP04435 133 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 SAA2P0DJI9 122 aaPredicted RBP10.16□□□□□ -0.78
PDPN-210ENST00000513143 PGAM2P15259 253 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 IL3RAP26951 378 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 HTR1DP28221 377 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 GPR12P47775 334 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 BPIFB3P59826 476 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 BAMBIQ13145 260 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 LDLRAD2Q5SZI1 272 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 MINOS1Q5TGZ0 78 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 ZNF818PQ6ZRF7 136 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 ZNF833PQ6ZTB9 187 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 TEX29Q8N6K0 151 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 ZBTB34Q8NCN2 500 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 BVESQ8NE79 360 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 NANPQ8TBE9 248 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 ENKURQ8TC29 256 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 C5orf30Q96GV9 206 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 ZNF486Q96H40 463 aaPredicted RBP10.16□□□□□ -0.78
PDPN-210ENST00000513143 AKR1E2Q96JD6 320 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 SCGB3A2Q96PL1 93 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 YAE1D1Q9NRH1 226 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 SDHAF2Q9NX18 166 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms