RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 C7orf65Q6ZTY9 151 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 SLC36A1Q7Z2H8 476 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 KTN1-AS1Q86SY8 53 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DYNAPQ8N1N2 210 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 FAM19A2Q8N3H0 131 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 OR51T1Q8NGJ9 327 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 OR4P4Q8NGL7 312 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 OR6N2Q8NGY6 317 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 OR11H2Q8NH07 326 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 OR2AE1Q8NHA4 323 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 FNDC9Q8TBE3 224 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DTD1Q8TEA8 209 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 TRNT1Q96Q11 434 aaKnown RBP0.04□□□□□ -2.4
PDGFC-208ENST00000512711 TBX5Q99593 518 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 CIB1Q99828 191 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 PRSS27Q9BQR3 290 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DOHHQ9BU89 302 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 GTSF1LQ9H1H1 148 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 VCX3BQ9H321 246 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 RGCCQ9H4X1 137 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 C11orf1Q9H5F2 150 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 VAPAQ9P0L0 249 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 RABL2BQ9UNT1 228 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 MED12Q93074 2177 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 AQRO60306 1485 aaKnown RBP eCLIP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 NAV1Q8NEY1 1877 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 NEURL4Q96JN8 1562 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 ANKHD1Q8IWZ3 2542 aaKnown RBP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 IGKV1D-42A0A075B6H8 117 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 IGHV3-64A0A075B6Q5 118 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 A0A1B0GTQ1 180 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 HMSDA8MTL9 139 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 C8orf87E5RJ46 101 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 RFXANKO14593 260 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 PLA2G10O15496 165 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 CYTH3O43739 400 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 KLRC4O43908 158 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 ORC5O43913 435 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 GMDSO60547 372 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 SNRNP200O75643 2136 aaKnown RBP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 STK16O75716 305 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 CIAO1O76071 339 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 UCHL1P09936 223 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 STAG3L3P0CL85 134 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 OR13C7P0DN81 318 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 NPPCP23582 126 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 GADD45AP24522 165 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 CRYBB3P26998 211 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 RCVRNP35243 200 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 RPA3P35244 121 aaPredicted RBP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 PEX19P40855 299 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 XCL1P47992 114 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 AQP4P55087 323 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 CLDN8P56748 225 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 GBE1Q04446 702 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 TRAM1Q15629 374 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 MOGQ16653 247 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 TRMT12Q53H54 448 aaKnown RBP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 CENPWQ5EE01 88 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 OR10K2Q6IF99 312 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 FAHD1Q6P587 224 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF705AQ6ZN79 300 aaPredicted RBP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 FAM183BPQ6ZVS7 135 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 FAM19A1Q7Z5A9 133 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 TMCO2Q7Z6W1 182 aaPredicted RBP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 LINC00523Q86TU6 105 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 SLC13A5Q86YT5 568 aaPredicted RBP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 Q8N2B8 174 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 SPICQ8N5J4 248 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 YIPF7Q8N8F6 280 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 CNEP1R1Q8N9A8 125 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 CCDC112Q8NEF3 446 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 OR4A15Q8NGL6 344 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 OR13C9Q8NGT0 318 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 OR6K2Q8NGY2 324 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 ANGPTL6Q8NI99 470 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 RPS4Y2Q8TD47 263 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 MBD3L1Q8WWY6 194 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF707Q96C28 371 aaPredicted RBP0.03□□□□□ -2.4
PDGFC-208ENST00000512711 ABHD14BQ96IU4 210 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 REG4Q9BYZ8 158 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 TMBIM4Q9HC24 238 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 SLC2A9Q9NRM0 540 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 DMAC2Q9NW81 257 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 TAAR3PQ9P1P4 343 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 GLS2Q9UI32 602 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 SNURFQ9Y675 71 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 STAB1Q9NY15 2570 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 ABCB11O95342 1321 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 ADAMTSL1Q8N6G6 1762 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 NSD2O96028 1365 aa0.03□□□□□ -2.4
PDGFC-208ENST00000512711 USH2AO75445 5202 aa0.03□□□□□ -2.41
PDGFC-208ENST00000512711 SPTBN4Q9H254 2564 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 COL6A3P12111 3177 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 BSNQ9UPA5 3926 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 HERC1Q15751 4861 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 H3BSA7 217 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 hCG_2039718K7EN88 272 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 BHLHE40O14503 412 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PHYHO14832 338 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms