RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 MUCL1Q96DR8 90 aa7.76□□□□□ -1.17
CPNE4-210ENST00000512332 TVP23CQ96ET8 276 aa7.76□□□□□ -1.17
CPNE4-210ENST00000512332 P2RX4Q99571 388 aa7.76□□□□□ -1.17
CPNE4-210ENST00000512332 NIPSNAP3BQ9BS92 247 aa7.76□□□□□ -1.17
CPNE4-210ENST00000512332 WDR61Q9GZS3 305 aaKnown RBP7.76□□□□□ -1.17
CPNE4-210ENST00000512332 LAMP3Q9UQV4 416 aa7.76□□□□□ -1.17
CPNE4-210ENST00000512332 A0A1W2PPE2 198 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 AHRRA9YTQ3 701 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 NKX2-8O15522 239 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 IGHV2-5P01817 119 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 HBZP02008 142 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF16P17020 682 aaPredicted RBP7.75□□□□□ -1.17
CPNE4-210ENST00000512332 OR3A1P47881 315 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 CCL11P51671 97 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 S100A12P80511 92 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 TRAT1Q6PIZ9 186 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 WDR82Q6UXN9 313 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 CYB561D1Q8N8Q1 229 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 OR1L1Q8NH94 360 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 MRPL37Q9BZE1 423 aaKnown RBP7.75□□□□□ -1.17
CPNE4-210ENST00000512332 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.75□□□□□ -1.17
CPNE4-210ENST00000512332 TMEM242Q9NWH2 141 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 CACNA1GO43497 2377 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 LRRC30A6NM36 301 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 NDUFS6O75380 124 aaKnown RBP7.75□□□□□ -1.17
CPNE4-210ENST00000512332 IFNA17P01571 189 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 BCL2P10415 239 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 IAPPP10997 89 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 TAGLN2P37802 199 aaKnown RBP7.75□□□□□ -1.17
CPNE4-210ENST00000512332 PNRC1Q12796 327 aaPredicted RBP7.75□□□□□ -1.17
CPNE4-210ENST00000512332 P2RY6Q15077 328 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 SMIM21Q3B7S5 101 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF718Q3SXZ3 478 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 TMEM41BQ5BJD5 291 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 IGF2-ASQ6U949 168 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF66Q6ZN08 573 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 CNEP1R1Q8N9A8 125 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 C9orf106Q8NAJ2 232 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 NINJ1Q92982 152 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 COQ2Q96H96 371 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 OR4C12Q96R67 309 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 RSG1Q9BU20 258 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 OR2D2Q9H210 308 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 ASCL3Q9NQ33 180 aa7.75□□□□□ -1.17
CPNE4-210ENST00000512332 hCG_1809904A0A1W2PP81 198 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 A0A1W2PR64 198 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 A0A1W2PRV1 198 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 EIF3GO75821 320 aaKnown RBP eCLIP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 CLDN14O95500 239 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 CECR9P0C854 216 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 DLK1P80370 383 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 HTD2P86397 168 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 AESQ08117 197 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 SPANXN5Q5MJ07 72 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF787Q6DD87 383 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 ADAM5Q6NVV9 412 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 VWA1Q6PCB0 445 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 Q6ZR03 302 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF826PQ6ZT77 177 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 MRGPRGQ86SM5 289 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 LILRB2Q8N423 598 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 UBALD1Q8TB05 177 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 TAF15Q92804 592 aaKnown RBP eCLIP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 RCC1LQ96I51 464 aaKnown RBP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 TCEAL7Q9BRU2 100 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 RBKSQ9H477 322 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 WDFY4Q6ZS81 3184 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 WNT9BO14905 357 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 RAB29O14966 203 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 TIMM8AO60220 97 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 RAMP3O60896 148 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 LY86O95711 162 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 PTBP3O95758 552 aaKnown RBP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 ADH4P08319 380 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 SMIM6P0DI80 62 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 GCH1P30793 250 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 CFHR2P36980 270 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 GLIPR1P48060 266 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 CEBPDP49716 269 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 BRWD1-AS2P59051 145 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 RPL30P62888 115 aaKnown RBP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 SLC38A11Q08AI6 406 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF726P1Q15940 193 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 FAM90A1Q86YD7 464 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 OR52L2PQ8NGH6 319 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 C5orf30Q96GV9 206 aa7.74□□□□□ -1.17
CPNE4-210ENST00000512332 CIB3Q96Q77 187 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 HSD17B10Q99714 261 aaKnown RBP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF71Q9NQZ8 489 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-210ENST00000512332 AGFG2O95081 481 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 KRASP01116 189 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 CGAP01215 116 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 GABRA2P47869 451 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 CR1LQ2VPA4 569 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 FAM90A2PQ658T7 463 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 TAAR6Q96RI8 345 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 AGMATQ9BSE5 352 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 GNG13Q9P2W3 67 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 VAX2Q9UIW0 290 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 BDP1A6H8Y1 2624 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms