RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CDH26Q8IXH8 852 aa7□□□□□ -1.29
NUP54-211ENST00000512151 JAGN1Q8N5M9 183 aa7□□□□□ -1.29
NUP54-211ENST00000512151 OR10K1Q8NGX5 313 aa7□□□□□ -1.29
NUP54-211ENST00000512151 TNFAIP8L1Q8WVP5 186 aa7□□□□□ -1.29
NUP54-211ENST00000512151 AP3S1Q92572 193 aa7□□□□□ -1.29
NUP54-211ENST00000512151 GPER1Q99527 375 aa7□□□□□ -1.29
NUP54-211ENST00000512151 NRIP2Q9BQI9 281 aa7□□□□□ -1.29
NUP54-211ENST00000512151 ALX4Q9H161 411 aaPredicted RBP7□□□□□ -1.29
NUP54-211ENST00000512151 KLK15Q9H2R5 256 aa7□□□□□ -1.29
NUP54-211ENST00000512151 MIXL1Q9H2W2 232 aa7□□□□□ -1.29
NUP54-211ENST00000512151 HES4Q9HCC6 221 aa7□□□□□ -1.29
NUP54-211ENST00000512151 RHBDL2Q9NX52 303 aa7□□□□□ -1.29
NUP54-211ENST00000512151 IL36RNQ9UBH0 155 aa7□□□□□ -1.29
NUP54-211ENST00000512151 ING4Q9UNL4 249 aa7□□□□□ -1.29
NUP54-211ENST00000512151 V9GYH0 126 aa7□□□□□ -1.29
NUP54-211ENST00000512151 IFITM5A6NNB3 132 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 SLC17A2O00624 439 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 PDCD5O14737 125 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 RGS5O15539 181 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 NOS1APO75052 506 aaPredicted RBP6.99□□□□□ -1.29
NUP54-211ENST00000512151 KDM4BO94953 1096 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 NXPH2O95156 264 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 TMEM225BP0DP42 221 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 ARHGDIBP52566 201 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 RUNX1Q01196 453 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 MEF2CQ06413 473 aaPredicted RBP6.99□□□□□ -1.29
NUP54-211ENST00000512151 DIAPH2-AS1Q14236 149 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 P2RY14Q15391 338 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 GLIPR1L1Q6UWM5 242 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 GDPD3Q7L5L3 318 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 LAX1Q8IWV1 398 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 NKAIN3Q8N8D7 197 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 PXT1Q8NFP0 134 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 SETD6Q8TBK2 473 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 ZNF596Q8TC21 504 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 CYYR1Q96J86 154 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 UQCC2Q9BRT2 126 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 NEK6Q9HC98 313 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 RBFOX1Q9NWB1 397 aaKnown RBP6.99□□□□□ -1.29
NUP54-211ENST00000512151 MRPS28Q9Y2Q9 187 aaKnown RBP6.99□□□□□ -1.29
NUP54-211ENST00000512151 LINC00312Q9Y6C7 94 aa6.99□□□□□ -1.29
NUP54-211ENST00000512151 A0A1W2PPI3 338 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 hADV38S2A0JD32 116 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 HSPA12AO43301 675 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 PSPNO60542 156 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 TMEM127O75204 238 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 PTBP1P26599 531 aaKnown RBP eCLIP6.98□□□□□ -1.295e-7■■■■□ 20.9
NUP54-211ENST00000512151 HTR2CP28335 458 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 CD34P28906 385 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 MNDAP41218 407 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 RANBP1P43487 201 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 DEFA1P59665 94 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 DEFA3P59666 94 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 QRFPP83859 136 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 UNC119Q13432 240 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 HES1Q14469 280 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 RBM39Q14498 530 aaKnown RBP6.98□□□□□ -1.29
NUP54-211ENST00000512151 ZNF79Q15937 498 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 C2orf76Q3KRA6 126 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 OR10K2Q6IF99 312 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 SFXN4Q6P4A7 337 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 LINC00322Q6ZN03 302 aaPredicted RBP6.98□□□□□ -1.29
NUP54-211ENST00000512151 RTN4RL2Q86UN3 420 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 SAXO1Q8IYX7 474 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 OR8H2Q8N162 312 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 ZNF491Q8N8L2 437 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 POC5Q8NA72 575 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 TMEM104Q8NE00 496 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 OR6M1Q8NGM8 313 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 HSPB9Q9BQS6 159 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 NEURL2Q9BR09 285 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 SRRQ9GZT4 340 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 ZNF581Q9P0T4 197 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 UBR4Q5T4S7 5183 aa6.98□□□□□ -1.29
NUP54-211ENST00000512151 CXorf65A6NEN9 183 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 TMEM14DPA8MWL7 114 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 OOSP1A8MZH6 123 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 AIPO00170 330 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 HTR3BO95264 441 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 HNRNPCP07910 306 aaKnown RBP eCLIP6.97□□□□□ -1.29
NUP54-211ENST00000512151 SERPINA2P20848 420 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 CDK2P24941 298 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 CEACAM3P40198 252 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 SNU13P55769 128 aaKnown RBP6.97□□□□□ -1.29
NUP54-211ENST00000512151 EWSR1Q01844 656 aaKnown RBP eCLIP6.97□□□□□ -1.29
NUP54-211ENST00000512151 RAB11BQ15907 218 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 IDNKQ5T6J7 187 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 AWAT2Q6E213 333 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 ELP2Q6IA86 826 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 MZT2AQ6P582 158 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 GDPD1Q8N9F7 314 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 OR5H6Q8NGV6 325 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 CHAC2Q8WUX2 184 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 ACOT12Q8WYK0 555 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 UBE2E2Q96LR5 201 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 SOSTQ9BQB4 213 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 THAP7Q9BT49 309 aaPredicted RBP6.97□□□□□ -1.29
NUP54-211ENST00000512151 CHST6Q9GZX3 395 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 METTL9Q9H1A3 318 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms