RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 OR6N1Q8NGY5 312 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 SLC37A2Q8TED4 501 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 GHSRQ92847 366 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 CLDN23Q96B33 292 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 COL21A1Q96P44 957 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 C20orf144Q9BQM9 153 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 GGACTQ9BVM4 153 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 FBXL15Q9H469 300 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 ZDHHC11Q9H8X9 412 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 ENY2Q9NPA8 101 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 KCNJ16Q9NPI9 418 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 RBM22Q9NW64 420 aaKnown RBP eCLIP2.7□□□□□ -1.98
NUP54-209ENST00000510569 TRMT112Q9UI30 125 aaKnown RBP2.7□□□□□ -1.98
NUP54-209ENST00000510569 JPT1Q9UK76 154 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 POLR1DQ9Y2S0 133 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 SCN4AP35499 1836 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 A0A1B0GWB2 263 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 ARL5CA6NH57 179 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 TMX2-CTNND1H3BSU7 103 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 K7EMT4 169 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 M0QYV0 167 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 MANBAO00462 879 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 ORC5O43913 435 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 ICOSLGO75144 302 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 BANF1O75531 89 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 IFNA4P05014 189 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 BPGMP07738 259 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 CD79AP11912 226 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 PAX6P26367 422 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 PSMB9P28065 219 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 HSPA9P38646 679 aaKnown RBP2.69□□□□□ -1.98
NUP54-209ENST00000510569 CDKN2BP42772 138 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 OR1E2P47887 323 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 PSMD8P48556 350 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 LIM2P55344 173 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 TAS2R43P59537 309 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 DNAJB13P59910 316 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 GTF2BQ00403 316 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 SLC10A7Q0GE19 358 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 TCP10Q12799 353 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 CDK10Q15131 360 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 NSDHLQ15738 373 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 PLPPR5Q32ZL2 321 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 KCTD16Q68DU8 428 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 LPCAT3Q6P1A2 487 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 SFXN4Q6P4A7 337 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 OPN5Q6U736 354 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 C12orf54Q6X4T0 127 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 FAM183BPQ6ZVS7 135 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 OAFQ86UD1 273 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 ARRDC1Q8N5I2 433 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 OR9Q1Q8NGQ5 310 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 ZNRF2Q8NHG8 242 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 MCFD2Q8NI22 146 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 GRPEL2Q8TAA5 225 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 SPPL2BQ8TCT7 592 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 PPCDCQ96CD2 204 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 SMARCD1Q96GM5 515 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 TMEM101Q96IK0 257 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 PGLYRP3Q96LB9 341 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 RARRES2Q99969 163 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 VPS25Q9BRG1 176 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 MND1Q9BWT6 205 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 ABCG5Q9H222 651 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 VSIRQ9H7M9 311 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 SPANXCQ9NY87 97 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 IDI2-AS1Q9NZ38 188 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 SCN2AQ99250 2005 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 TRPM7Q96QT4 1865 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 MYH11P35749 1972 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 SCN9AQ15858 1988 aa2.69□□□□□ -1.98
NUP54-209ENST00000510569 SIP14410 1827 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 PARP14Q460N5 1801 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 TRBV6-6A0A0A6YYG2 114 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 D6RAR5 112 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 TRAPPC2LH3BP13 241 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 CCDC22O60826 627 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 TBL1XO60907 577 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 SLC25A27O95847 323 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 LALBAP00709 142 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 C1QCP02747 245 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 OR5G3P0C626 314 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 CD34P28906 385 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 KIR2DS2P43631 304 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 MAP2K4P45985 399 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 KLK7P49862 253 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 RPS20P60866 119 aaKnown RBP2.68□□□□□ -1.98
NUP54-209ENST00000510569 DYNLL1P63167 89 aaKnown RBP2.68□□□□□ -1.98
NUP54-209ENST00000510569 SLC35A1P78382 337 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 SMAGPQ0VAQ4 97 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 BAMBIQ13145 260 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 GRK1Q15835 563 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 ACOT6Q3I5F7 207 aaPredicted RBP2.68□□□□□ -1.98
NUP54-209ENST00000510569 CLEC12AQ5QGZ9 265 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 TMEM215Q68D42 235 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 LAMTOR1Q6IAA8 161 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 OR10K2Q6IF99 312 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 TBPL2Q6SJ96 375 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 SPNS3Q6ZMD2 512 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 SMIM5Q71RC9 77 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms