RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 ZNF660Q6AZW8 331 aaPredicted RBP8.03□□□□□ -1.12
DDX41-211ENST00000510171 SIGIRRQ6IA17 410 aa8.03□□□□□ -1.12
DDX41-211ENST00000510171 Q8N1Y9 231 aa8.03□□□□□ -1.12
DDX41-211ENST00000510171 FAM46BQ96A09 425 aa8.03□□□□□ -1.12
DDX41-211ENST00000510171 FLYWCH2Q96CP2 140 aaKnown RBP8.03□□□□□ -1.12
DDX41-211ENST00000510171 NABP2Q9BQ15 211 aa8.03□□□□□ -1.12
DDX41-211ENST00000510171 EDA2RQ9HAV5 297 aa8.03□□□□□ -1.12
DDX41-211ENST00000510171 TAF9BQ9HBM6 251 aa8.03□□□□□ -1.12
DDX41-211ENST00000510171 MBNL3Q9NUK0 354 aaKnown RBP8.03□□□□□ -1.12
DDX41-211ENST00000510171 KIAA1456Q9P272 454 aa8.03□□□□□ -1.12
DDX41-211ENST00000510171 FOXA2Q9Y261 457 aaPredicted RBP8.03□□□□□ -1.12
DDX41-211ENST00000510171 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 A0A087WW49 117 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 UBE2QL1A1L167 161 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 A8MZ25 164 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 SOX15O60248 233 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 RGS11O94810 467 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 HSPB1P04792 205 aaKnown RBP8.02□□□□□ -1.13
DDX41-211ENST00000510171 SRMP19623 302 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 VEGFCP49767 419 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 HTD2P86397 168 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 TMEM267Q0VDI3 215 aaPredicted RBP8.02□□□□□ -1.13
DDX41-211ENST00000510171 MED22Q15528 200 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 ECSCRQ19T08 205 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 HSD17B12Q53GQ0 312 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 RBM48Q5RL73 367 aaKnown RBP8.02□□□□□ -1.13
DDX41-211ENST00000510171 C1orf100Q5SVJ3 147 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 ADAMTSL5Q6ZMM2 481 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 LRRTM1Q86UE6 522 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 SGPP2Q8IWX5 399 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 NPBQ8NG41 125 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 OR52L2PQ8NGH6 319 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 KCNG3Q8TAE7 436 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 CASTOR1Q8WTX7 329 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 GALMQ96C23 342 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 NEDD4LQ96PU5 975 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 ABHD14AQ9BUJ0 271 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 TMED9Q9BVK6 235 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 ELOVL1Q9BW60 279 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 TMEM59Q9BXS4 323 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 MRPL20Q9BYC9 149 aaKnown RBP8.02□□□□□ -1.13
DDX41-211ENST00000510171 C19orf73Q9NVV2 129 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 JPT1Q9UK76 154 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 LSM2Q9Y333 95 aaKnown RBP8.02□□□□□ -1.13
DDX41-211ENST00000510171 TPRKBQ9Y3C4 175 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 RYR2Q92736 4967 aa8.02□□□□□ -1.13
DDX41-211ENST00000510171 ARPC1BO15143 372 aaKnown RBP8.01□□□□□ -1.13
DDX41-211ENST00000510171 HSPA12AO43301 675 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 NDUFA3O95167 84 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 UCHL1P09936 223 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 CD37P11049 281 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 PSMA1P25786 263 aaKnown RBP8.01□□□□□ -1.13
DDX41-211ENST00000510171 HTR2CP28335 458 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 PPP1CCP36873 323 aaKnown RBP8.01□□□□□ -1.13
DDX41-211ENST00000510171 RANBP1P43487 201 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 CRIP2P52943 208 aaPredicted RBP8.01□□□□□ -1.13
DDX41-211ENST00000510171 RPS27AP62979 156 aaKnown RBP8.01□□□□□ -1.13
DDX41-211ENST00000510171 CX3CL1P78423 397 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 INSL4Q14641 139 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 GNMTQ14749 295 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 TRAM1Q15629 374 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 C19orf54Q5BKX5 351 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 LY6G6FQ5SQ64 297 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 CEACAM19Q7Z692 300 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 ANKRD13BQ86YJ7 626 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 ODF3L1Q8IXM7 274 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 TCTEX1D1Q8N7M0 179 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 OR6M1Q8NGM8 313 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 MRPL30Q8TCC3 161 aaKnown RBP8.01□□□□□ -1.13
DDX41-211ENST00000510171 UFD1Q92890 307 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 ABRACLQ9P1F3 81 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 NKX1-2Q9UD57 310 aaPredicted RBP8.01□□□□□ -1.13
DDX41-211ENST00000510171 RNF150Q9ULK6 438 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 STUB1Q9UNE7 303 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 FBXO7Q9Y3I1 522 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 NUBP2Q9Y5Y2 271 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 A3GALT2U3KPV4 340 aa8.01□□□□□ -1.13
DDX41-211ENST00000510171 SLC22A1O15245 554 aa8□□□□□ -1.13
DDX41-211ENST00000510171 YPEL1O60688 119 aa8□□□□□ -1.13
DDX41-211ENST00000510171 ARL6IP5O75915 188 aa8□□□□□ -1.13
DDX41-211ENST00000510171 BPNT1O95861 308 aa8□□□□□ -1.13
DDX41-211ENST00000510171 IGHV3-11P01762 117 aa8□□□□□ -1.13
DDX41-211ENST00000510171 EGR2P11161 476 aaPredicted RBP8□□□□□ -1.13
DDX41-211ENST00000510171 CD40LGP29965 261 aa8□□□□□ -1.13
DDX41-211ENST00000510171 OR3A3P47888 321 aa8□□□□□ -1.13
DDX41-211ENST00000510171 NDPQ00604 133 aa8□□□□□ -1.13
DDX41-211ENST00000510171 IRF3Q14653 427 aa8□□□□□ -1.13
DDX41-211ENST00000510171 PLGLAQ15195 96 aa8□□□□□ -1.13
DDX41-211ENST00000510171 LIPKQ5VXJ0 399 aa8□□□□□ -1.13
DDX41-211ENST00000510171 PYHIN1Q6K0P9 492 aa8□□□□□ -1.13
DDX41-211ENST00000510171 ZNF833PQ6ZTB9 187 aa8□□□□□ -1.13
DDX41-211ENST00000510171 MOB1BQ7L9L4 216 aa8□□□□□ -1.13
DDX41-211ENST00000510171 HAPLN4Q86UW8 402 aa8□□□□□ -1.13
DDX41-211ENST00000510171 OR2AK2Q8NG84 335 aa8□□□□□ -1.13
DDX41-211ENST00000510171 ABHD5Q8WTS1 349 aa8□□□□□ -1.13
DDX41-211ENST00000510171 RHOVQ96L33 236 aa8□□□□□ -1.13
DDX41-211ENST00000510171 MS4A10Q96PG2 267 aa8□□□□□ -1.13
DDX41-211ENST00000510171 YPEL2Q96QA6 119 aa8□□□□□ -1.13
DDX41-211ENST00000510171 SULT4A1Q9BR01 284 aa8□□□□□ -1.13
DDX41-211ENST00000510171 SPATA25Q9BR10 227 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms