RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 C20orf85Q9H1P6 137 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 MMP28Q9H239 520 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 HEXA-AS1Q9H8Q6 139 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 MGAT4AQ9UM21 535 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 TMEM30CPA0ZSE6 113 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 C7orf66A4D0T2 115 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 DISC1C4P0D8 188 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 MGST3O14880 152 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 FCER2P06734 321 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 ERP29P30040 261 aaKnown RBP11.79□□□□□ -0.52
HMGCL-208ENST00000509389 ERVFRD-1P60508 538 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 RPL31P62899 125 aaKnown RBP11.79□□□□□ -0.52
HMGCL-208ENST00000509389 HLA-DRB3P79483 266 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 KIR2DS1Q14954 304 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 ATXN7L3Q14CW9 347 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-208ENST00000509389 CDK10Q15131 360 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 GRK1Q15835 563 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 AANATQ16613 207 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 HIST2H2BDQ6DRA6 164 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 OR4C13Q8NGP0 309 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 OR5H2Q8NGV7 314 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 CHAC2Q8WUX2 184 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 SLC25A21Q9BQT8 299 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-208ENST00000509389 NUDT15Q9NV35 164 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 A0A1W2PPH5 198 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 CCL3L1P16619 93 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 AADACL3Q5VUY0 350 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 C11orf88Q6PI97 169 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 ZNF782Q6ZMW2 699 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-208ENST00000509389 PIFOQ8TCI5 191 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 NEK7Q8TDX7 302 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 RANBP3Q9H6Z4 567 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-208ENST00000509389 MCUBQ9NWR8 336 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 SCP2D1Q9UJQ7 156 aa11.79□□□□□ -0.52
HMGCL-208ENST00000509389 PLXNB1O43157 2135 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 IGKV1-6A0A0C4DH72 117 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 TRDCB7Z8K6 153 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 FABP7O15540 132 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 PMP2P02689 132 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 TK1P04183 234 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 COX7A1P24310 79 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 ZNF273Q14593 569 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 DHRS11Q6UWP2 260 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 IDO2Q6ZQW0 420 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 KLHDC1Q8N7A1 406 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 C11orf44Q8N8P7 122 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 OR4A4PQ8NGN8 299 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 OR2T6Q8NHC8 308 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 CFHR4Q92496 578 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 TOLLIPQ9H0E2 274 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 RAB18Q9NP72 206 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 NECAP2Q9NVZ3 263 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 ZNF221Q9UK13 617 aa11.78□□□□□ -0.52
HMGCL-208ENST00000509389 hCG_1809904A0A1W2PP81 198 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 A0A1W2PPE2 198 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 A0A1W2PR64 198 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 A0A1W2PRV1 198 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 INMT-MINDY4F8WBC2 141 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 CHST1O43916 411 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 PEX14O75381 377 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 TUSC2O75896 110 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 GSTT2P0CG29 244 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 RCC1P18754 421 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-208ENST00000509389 P2RX3P56373 397 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 LGALS4P56470 323 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 ARPC4P59998 168 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 SURF2Q15527 256 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-208ENST00000509389 TRAT1Q6PIZ9 186 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 ASCC1Q8N9N2 400 aaKnown RBP11.77□□□□□ -0.53
HMGCL-208ENST00000509389 TERB2Q8NHR7 220 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 GINS4Q9BRT9 223 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 ALX4Q9H161 411 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-208ENST00000509389 CHMP1AQ9HD42 196 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-208ENST00000509389 EHFQ9NZC4 300 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 KIF25Q9UIL4 384 aa11.77□□□□□ -0.53
HMGCL-208ENST00000509389 TRBV6-7A0A0A0MS04 114 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 ODAMA1E959 279 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 FUOMA2VDF0 154 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 G3V4G9 280 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 CTXN2P0C2S0 81 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 H2AFB2P0C5Z0 115 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 OR5H8P0DN80 308 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 CGB3P0DN86 165 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 CGB7P0DN87 165 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 ECI1P42126 302 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 OR3A3P47888 321 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 BCAP31P51572 246 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 DLX6P56179 175 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 AESQ08117 197 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 TATDN3Q17R31 274 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 KRBOX4Q5JUW0 171 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 TCF23Q7RTU1 214 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 TMEM17Q86X19 198 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 CADM3Q8N126 398 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 DYNAPQ8N1N2 210 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 GIMAP1Q8WWP7 306 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 NPFFR1Q9GZQ6 430 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 GHITMQ9H3K2 345 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms