RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 KIR2DS1Q14954 304 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 SRSF7Q16629 238 aaKnown RBP eCLIP6.92□□□□□ -1.3
SNCA-211ENST00000508895 MORN2Q502X0 79 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 CT45A1Q5HYN5 189 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 LY6G6FQ5SQ64 297 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 CNIH2Q6PI25 160 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 ODF3L1Q8IXM7 274 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 GVQW1Q8N7I0 195 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 OR4A4PQ8NGN8 299 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 OR10X1Q8NGY0 326 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 OR5R1Q8NH85 324 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 CT45A3Q8NHU0 189 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 TOMM40LQ969M1 308 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 MALSU1Q96EH3 234 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 YPEL2Q96QA6 119 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 C6orf62Q9GZU0 229 aaPredicted RBP6.92□□□□□ -1.3
SNCA-211ENST00000508895 DPM3Q9P2X0 92 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 EXTL2Q9UBQ6 330 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 ADAM30Q9UKF2 790 aa6.92□□□□□ -1.3
SNCA-211ENST00000508895 AMMECR1Q9Y4X0 333 aaPredicted RBP6.92□□□□□ -1.3
SNCA-211ENST00000508895 SAA2-SAA4A0A096LPE2 208 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 TRBV6-7A0A0A0MS04 114 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 ADARB2-AS1A8MUL3 147 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 LEUTXA8MZ59 168 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 FAM25AB3EWG3 89 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 FAM25CB3EWG5 89 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 FAM25GB3EWG6 89 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 HSD17B6O14756 317 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 ST8SIA5O15466 376 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 RGS5O15539 181 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 SAA2P0DJI9 122 aaPredicted RBP6.91□□□□□ -1.3
SNCA-211ENST00000508895 PRRX1P54821 245 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 RPL15P61313 204 aaKnown RBP6.91□□□□□ -1.3
SNCA-211ENST00000508895 ZNF816Q0VGE8 651 aaPredicted RBP6.91□□□□□ -1.3
SNCA-211ENST00000508895 AANATQ16613 207 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 PDLIM3Q53GG5 364 aaPredicted RBP6.91□□□□□ -1.3
SNCA-211ENST00000508895 TREML4Q6UXN2 200 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 SNX29P2Q8IUI4 249 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 Q8N2B8 174 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 KLHDC1Q8N7A1 406 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 BEST4Q8NFU0 473 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 OR2AK2Q8NG84 335 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 MCFD2Q8NI22 146 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 CFHR4Q92496 578 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 ST6GALNAC6Q969X2 333 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 RPEQ96AT9 228 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 TOLLIPQ9H0E2 274 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 RDH8Q9NYR8 311 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 ANXA10Q9UJ72 324 aa6.91□□□□□ -1.3
SNCA-211ENST00000508895 KMT2CQ8NEZ4 4911 aaKnown RBP6.9□□□□□ -1.3
SNCA-211ENST00000508895 A0A1B0GUS0 222 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 BTBD17A6NE02 478 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 ITGB1BP1O14713 200 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 TIMM23O14925 209 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 BET1O15155 118 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 HSPA12AO43301 675 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 RGS11O94810 467 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 FCER2P06734 321 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 LPLP06858 475 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 CD28P10747 220 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 ZBTB25P24278 435 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 CEACAM3P40198 252 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 OR3A3P47888 321 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 REG1BP48304 166 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 DYNLT3P51808 116 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 RNASE12Q5GAN4 147 aaKnown RBP6.9□□□□□ -1.3
SNCA-211ENST00000508895 TCTEX1D4Q5JR98 221 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 ZNF833PQ6ZTB9 187 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 HOGA1Q86XE5 327 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 H1FOOQ8IZA3 346 aaPredicted RBP6.9□□□□□ -1.3
SNCA-211ENST00000508895 OR56B4Q8NH76 319 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 GPX8Q8TED1 209 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 RTN4IP1Q8WWV3 396 aaPredicted RBP6.9□□□□□ -1.3
SNCA-211ENST00000508895 CREB3L1Q96BA8 519 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 C5orf30Q96GV9 206 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 ABHD1Q96SE0 405 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 ZNF251Q9BRH9 671 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 AGMATQ9BSE5 352 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 ST6GALNAC5Q9BVH7 336 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 C11orf54Q9H0W9 315 aaPredicted RBP6.9□□□□□ -1.3
SNCA-211ENST00000508895 NDUFA13Q9P0J0 144 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 MRPS7Q9Y2R9 242 aaKnown RBP6.9□□□□□ -1.3
SNCA-211ENST00000508895 A3GALT2U3KPV4 340 aa6.9□□□□□ -1.3
SNCA-211ENST00000508895 IGHV3-72A0A0B4J1Y9 119 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 IGHV1-3A0A0C4DH29 117 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 A6NHS1 94 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 FAM90A9PA6NNJ1 464 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 OOSP1A8MZH6 123 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 ZNF736B4DX44 427 aaPredicted RBP6.89□□□□□ -1.31
SNCA-211ENST00000508895 VSIG10L2P0DP72 767 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 NAT1P18440 290 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 IL3RAP26951 378 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 PRSS3P35030 304 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 CBX5P45973 191 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 RAB7AP51149 207 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 DGCR2P98153 550 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 RPL39P5Q59GN2 51 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 CCDC144NLQ6NUI1 221 aa6.89□□□□□ -1.31
SNCA-211ENST00000508895 C1QL4Q86Z23 238 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms