RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 UBL4BQ8N7F7 174 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 ZNF615Q8N8J6 731 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 TMEM161BQ8NDZ6 487 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 BPIFB6Q8NFQ5 453 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR51D1Q8NGF3 324 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR1P1Q8NH06 330 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 JOSD2Q8TAC2 188 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 ASB17Q8WXJ9 295 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 TMEM109Q9BVC6 243 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 ZNF586Q9NXT0 402 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 PHLDA3Q9Y5J5 127 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 SLIT3O75094 1523 aa2.35□□□□□ -2.03
TRAPPC13-209ENST00000508304 NPATQ14207 1427 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 RPRD2Q5VT52 1461 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 TUBGCP6Q96RT7 1819 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 A8MWP4 228 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 ATP6V0CP27449 155 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 CD34P28906 385 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 CRABP1P29762 137 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 TGFBR2P37173 567 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 HERVK_113P63121 156 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 AESQ08117 197 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 PDGFRLQ15198 375 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 FAM78BQ5VT40 261 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 Q6ZRU5 148 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 LYZL2Q7Z4W2 148 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 BAP18Q8IXM2 172 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 YIPF7Q8N8F6 280 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 CDC26Q8NHZ8 85 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 C12orf43Q96C57 262 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 IMP4Q96G21 291 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 DIRAS2Q96HU8 199 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 RSPO3Q9BXY4 272 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 PECRQ9BY49 303 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR51I1Q9H343 314 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 ZNF492Q9P255 531 aa2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 ZNF230Q9UIE0 474 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC13-209ENST00000508304 TICRRQ7Z2Z1 1910 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 TRBV24-1A0A075B6N3 115 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 IGHV3OR15-7A0A075B7D8 119 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 IGHV3OR16-8A0A075B7F1 116 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 A0A1W2PQL4 384 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 K7EM74 188 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 TRAPPC3O43617 180 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 GSTZ1O43708 216 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 IGHG2P01859 326 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 REG1AP05451 166 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 CA7P43166 264 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 TMEM33P57088 247 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 SPCS3P61009 180 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 NAA20P61599 178 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 BTN3A2P78410 334 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 BSPH1Q075Z2 132 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 JOSD1Q15040 202 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 HIST3H3Q16695 136 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 AKIRIN2Q53H80 203 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 ZNF660Q6AZW8 331 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 ZFAND6Q6FIF0 208 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 Q6ZQT7 251 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 RNF182Q8N6D2 247 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 OR2D2Q9H210 308 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 DUSP21Q9H596 190 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 ZNF286AQ9HBT8 521 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 XPNPEP1Q9NQW7 623 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 SLC22A13Q9Y226 551 aa2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 CARHSP1Q9Y2V2 147 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 PCYT1BQ9Y5K3 369 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 CHD2O14647 1828 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 BAZ1BQ9UIG0 1483 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-209ENST00000508304 ARAP3Q8WWN8 1544 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 TGIF2-C20orf24A0A0A6YYL0 155 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 A0A1B0GV50 99 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 C16orf90A8MZG2 172 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 C4orf51C9J302 202 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 H3BMM0 161 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 H3BQ85 93 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 DENRO43583 198 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 SH2D1AO60880 128 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 IFNA6P05013 189 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 HLA-DQB2P05538 268 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 CDK2P24941 298 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 IDH3GP51553 393 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 CTBP2P56545 445 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 LRRC75BQ2VPJ9 315 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 DNLZQ5SXM8 178 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 C3orf22Q8N5N4 141 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 OR1M1Q8NGA1 313 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 OR2V1Q8NHB1 315 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 MS4A6EQ96DS6 147 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 OR52B2Q96RD2 323 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 ZNF2Q9BSG1 426 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 GNB1LQ9BYB4 327 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 IL20Q9NYY1 176 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 SLC23A2Q9UGH3 650 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 RPUSD1Q9UJJ7 312 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 KIAA1671Q9BY89 1806 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 SNAPC4Q5SXM2 1469 aa2.32□□□□□ -2.04
TRAPPC13-209ENST00000508304 MYO5BQ9ULV0 1848 aa2.31□□□□□ -2.04
TRAPPC13-209ENST00000508304 EVPLLA8MZ36 301 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms