RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 FOLR3P41439 243 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 GFRA1P56159 465 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 TCEAL6Q6IPX3 200 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 TMEM37Q8WXS4 190 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 ACTR3CQ9C0K3 210 aaPredicted RBP11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 USF3Q68DE3 2245 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 SIRPB1O00241 398 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 SS18L1O75177 396 aaPredicted RBP11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 SSX2Q16385 188 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 TUSC5Q8IXB3 177 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 RAB24Q969Q5 203 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 TMEM45BQ96B21 275 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 WFIKKN1Q96NZ8 548 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 OR4F4Q96R69 305 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 C2orf88Q9BSF0 95 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 FUT9Q9Y231 359 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 CELA3AP09093 270 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 WNT2P09544 360 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 NUBP1P53384 320 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 USF2Q15853 346 aaPredicted RBP11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 Q6P435 159 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 CENPVQ7Z7K6 275 aaPredicted RBP11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 DRAM1Q8N682 238 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 OR5B12Q96R08 314 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 PCSK5Q92824 1860 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 GTF3C1Q12789 2109 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 HRASP01112 189 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 CA6P23280 308 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 PSMB3P49720 205 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 IDH3GP51553 393 aaPredicted RBP11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 GNB2P62879 340 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 LYSMD4Q5XG99 296 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 PPP1R32Q7Z5V6 425 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 LINC00596Q86U02 117 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 TGIF2LYQ8IUE0 185 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 OR5T1Q8NG75 326 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 TMEM170AQ8WVE7 144 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 POM121L2Q96KW2 1035 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 PARD6GQ9BYG4 376 aaPredicted RBP11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 STRADBQ9C0K7 418 aa11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 LIN7CQ9NUP9 197 aaKnown RBP11.34□□□□□ -0.59
SNCAIP-209ENST00000508017 DNAJC13O75165 2243 aa11.33□□□□□ -0.59
SNCAIP-209ENST00000508017 NPIPB11E5RHQ5 1161 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 RAMP3O60896 148 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 GYPAP02724 150 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 CXCL12P48061 93 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 TFF3Q07654 80 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 PMS2P11Q13670 270 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 NRN1LQ496H8 165 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 SPATA46Q5T0L3 261 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 FAM53AQ6NSI3 398 aaPredicted RBP11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 TGIF2LXQ8IUE1 241 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 CLN8Q9UBY8 286 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 IGHV3-64DA0A0J9YX35 117 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 ANKRD30BLA7E2S9 258 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 EREGO14944 169 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 OR4A8P0C604 315 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 WNT5AP41221 380 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 GNG3P63215 75 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 PMP22Q01453 160 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 TNFRSF9Q07011 255 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 ACTL10Q5JWF8 245 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 SPINK14Q6IE38 97 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 ZNF573Q86YE8 665 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 OR10G9Q8NGN4 311 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 OR10G7Q8NGN6 311 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 OR51I2Q9H344 312 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 TRAPPC2LQ9UL33 140 aa11.33□□□□□ -0.6
SNCAIP-209ENST00000508017 IGKV3D-15A0A087WSY6 115 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 PIGBOS1A0A0B4J2F0 54 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 C1QTNF9BB2RNN3 333 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 CEACAM6P40199 344 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 PDLIM4P50479 330 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 NOL4LQ96MY1 436 aaPredicted RBP11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 DDA1Q9BW61 102 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 LINC00470Q9BZP3 86 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 TIMM9Q9Y5J7 89 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 NBEAQ8NFP9 2946 aa11.32□□□□□ -0.6
SNCAIP-209ENST00000508017 CTXND1A0A1B0GTU2 59 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 LRP5LA4QPB2 252 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 PAGE4O60829 102 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 FOSL1P15407 271 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 BMP5P22003 454 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 NPPCP23582 126 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 G6PCP35575 357 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 FFAR4Q5NUL3 377 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 ZNF497Q6ZNH5 498 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 AURKAIP1Q9NWT8 199 aaPredicted RBP11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 WDFY4Q6ZS81 3184 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 B4E171 279 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 OR2H2O95918 312 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 KRASP01116 189 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 COX5BP10606 129 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms