RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SAXO1Q8IYX7 474 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 NEK7Q8TDX7 302 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 RLN3Q8WXF3 142 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 TNRC18O15417 2968 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 ABCA7Q8IZY2 2146 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 B4GALT1P15291 398 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 PAFAH1B2P68402 229 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 KMT5CQ86Y97 462 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 OR2H1Q9GZK4 316 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 FGF23Q9GZV9 251 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 RIMS4Q9H426 269 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 ELOVL5Q9NYP7 299 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 TP53TG3Q9ULZ0 132 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 TRBV6-6A0A0A6YYG2 114 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 LRP5LA4QPB2 252 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 HS3ST1O14792 307 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 NTF4P34130 210 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 ADMP35318 185 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 YPEL3P61236 119 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 SELENOTP62341 195 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 TMEM183BQ1AE95 376 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 ZNF585BQ52M93 769 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 OR8G2PQ6IF36 304 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 OR5T1Q8NG75 326 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 FGFBP3Q8TAT2 258 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 HLA-CQ95604 372 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 OR51B6Q9H340 312 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 ESDP10768 282 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 RABEPKQ7Z6M1 372 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 ZDHHC23Q8IYP9 409 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 ARL6IP6Q8N6S5 226 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 CPT1CQ8TCG5 803 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 TMEM9BQ9NQ34 198 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 MTCH1Q9NZJ7 389 aa14.49□□□□□ -0.09
SQSTM1-211ENST00000506690 TMEM265A0A087WTH1 108 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 C11orf94C9JXX5 98 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 FAM90A26D6RGX4 464 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 EPHA8P29322 1005 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 LINC00310P59036 64 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 TPPP2P59282 170 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 RAET1LQ5VY80 246 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 LRP11Q86VZ4 500 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 DEFB119Q8N690 84 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 PCED1AQ9H1Q7 454 aa14.48□□□□□ -0.09
SQSTM1-211ENST00000506690 A0A0J9YW62 118 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 SRXN1Q9BYN0 137 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 YLPM1P49750 1951 aaKnown RBP14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 ZIC3O60481 467 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 CD82P27701 267 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 MPLP40238 635 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 OR5I1Q13606 314 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 FFAR4Q5NUL3 377 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 TCF23Q7RTU1 214 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 SF3B5Q9BWJ5 86 aaKnown RBP14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 C1QTNF5Q9BXJ0 243 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 DEFB126Q9BYW3 111 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 AURKAIP1Q9NWT8 199 aaPredicted RBP14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 ZFP30Q9Y2G7 519 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 PAM16Q9Y3D7 125 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 ZNF407Q9C0G0 2248 aa14.47□□□□□ -0.09
SQSTM1-211ENST00000506690 GRIFINA4D1Z8 144 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 COX5AP20674 150 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 GNB1P62873 340 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 ATP6V1FQ16864 119 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 NUFIP2Q7Z417 695 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 SGMS2Q8NHU3 365 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 ALKBH3Q96Q83 286 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 PHF7Q9BWX1 381 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 NPIPB11E5RHQ5 1161 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 TIAF1O95411 115 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 C1QTNF9P0C862 333 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 COL5A1-AS1Q5SY13 56 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 FBXW9Q5XUX1 488 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 DTD1Q8TEA8 209 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 VAMP8Q9BV40 100 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 TMEM147Q9BVK8 224 aa14.46□□□□□ -0.09
SQSTM1-211ENST00000506690 DOCK11Q5JSL3 2073 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 LNP1A1A4G5 178 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 PDE6DO43924 150 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 CLDN1O95832 211 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 CD27P26842 260 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 CDKN1AP38936 164 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 GPM6AP51674 278 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 AGBL5Q8NDL9 886 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 FOXB1Q99853 325 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 PRDM14Q9GZV8 571 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 ASCL3Q9NQ33 180 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 LIN7CQ9NUP9 197 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 OR1A1Q9P1Q5 309 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 A0A1W2PR80 420 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 SIAH2O43255 324 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 SRFP11831 508 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 COMPP49747 757 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 LHX2P50458 406 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 DSCR4P56555 118 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 PCBD1P61457 104 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 PMP22Q01453 160 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 WDR74Q6RFH5 385 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 MYPOPQ86VE0 399 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms