RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CORO2AQ92828 525 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 RHOVQ96L33 236 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 ZNF714Q96N38 554 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 TM2D1Q9BX74 207 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 ZDHHC11Q9H8X9 412 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 ASCL3Q9NQ33 180 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 A0A0A6YYD4 124 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 RNASEK-C17orf49H0YIS7 233 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 TOX4O94842 621 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 FAM122AQ96E09 287 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 ADTRPQ96IZ2 230 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 DHRS9Q9BPW9 319 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 CRYM-AS1A6NIL9 109 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 LRP11Q86VZ4 500 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 FAM216BQ8N7L0 139 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 OR52M1Q8NGK5 317 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 TMEM230Q96A57 120 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 STARD4Q96DR4 205 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 PIPOXQ9P0Z9 390 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 PQLC2LA1A4F0 135 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 E9PLN8 166 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 J3QW42 95 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 FGF2P09038 288 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 P2RY1P47900 373 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 RUNX1Q01196 453 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 NECAP1Q8NC96 275 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 BVESQ8NE79 360 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 SSMEM1Q8WWF3 244 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 FLYWCH2Q96CP2 140 aaKnown RBP11.97□□□□□ -0.49
TCOF1-207ENST00000504761 IL19Q9UHD0 177 aa11.97□□□□□ -0.49
TCOF1-207ENST00000504761 IGKV1D-8A0A087WSZ0 117 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 MBPP02686 304 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-207ENST00000504761 RBP4P02753 201 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 ZNF250P15622 560 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 ZP1P60852 638 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 HGFACQ04756 655 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 HMGN3Q15651 99 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 HILPDAQ9Y5L2 63 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 LILRA1O75019 489 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 TPPP3Q9BW30 176 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 POMT1Q9Y6A1 747 aa11.96□□□□□ -0.49
TCOF1-207ENST00000504761 ANKHD1Q8IWZ3 2542 aaKnown RBP11.96□□□□□ -0.49
TCOF1-207ENST00000504761 IGKV1-27A0A075B6S5 117 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 MDFIC2A0A1B0GVS7 189 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 K7N7A8 449 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 RAB29O14966 203 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 PJVKQ0ZLH3 352 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 HIST3H3Q16695 136 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 ACP7Q6ZNF0 438 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 FGFRL1Q8N441 504 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 ZDHHC16Q969W1 377 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 TP53RKQ96S44 253 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 PRELID1Q9Y255 219 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 IGHV1-18A0A0C4DH31 117 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 MPTX1A8MV57 137 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 C12orf77C9JDV5 145 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 F8VVB4 439 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 F8VWA3 439 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 MBP02144 154 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 DTX1Q86Y01 620 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 VKORC1L1Q8N0U8 176 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 BPIFCQ8NFQ6 507 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 TVP23CQ96ET8 276 aa11.96□□□□□ -0.5
TCOF1-207ENST00000504761 C5orf42Q9H799 3197 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 C1QL1O75973 258 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 NTF4P34130 210 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 ARF6P62330 175 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 RPRMLQ8N4K4 120 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 NUDT16L1Q9BRJ7 211 aaKnown RBP11.95□□□□□ -0.5
TCOF1-207ENST00000504761 SMCO4Q9NRQ5 59 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 ELOVL5Q9NYP7 299 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 IGHV3-21A0A0B4J1V1 117 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 A0A1B0GU03 582 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 COX7A2P2O60397 106 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 WT1P19544 449 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-207ENST00000504761 NCR3LG1Q68D85 454 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 S100A7AQ86SG5 101 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 ZFP82Q8N141 532 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 MARS2Q96GW9 593 aaKnown RBP11.95□□□□□ -0.5
TCOF1-207ENST00000504761 DIRC2Q96SL1 478 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 SIRT7Q9NRC8 400 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 SLC2A8Q9NY64 477 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 CHD7Q9P2D1 2997 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 ADAMTS9Q9P2N4 1935 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 KIAA0141Q14154 515 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-207ENST00000504761 ZBTB34Q8NCN2 500 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 MRPL37Q9BZE1 423 aaKnown RBP11.95□□□□□ -0.5
TCOF1-207ENST00000504761 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
TCOF1-207ENST00000504761 MAP1LC3B2A6NCE7 125 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 F6UZH7 168 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 CEACAM3P40198 252 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 C5orf24Q7Z6I8 188 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 DRAM1Q8N682 238 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 MAP1LC3BQ9GZQ8 125 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 IGHV1-69-2A0A0G2JMI3 117 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
TCOF1-207ENST00000504761 SFTA3P0C7M3 94 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 PRB3Q04118 309 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-207ENST00000504761 TMEM252Q8N6L7 170 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms