RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SNAPC3Q92966 411 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 IFT46Q9NQC8 304 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 J3QRK9 145 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 GAPDHP04406 335 aaKnown RBP13.24□□□□□ -0.29
SCLT1-205ENST00000503401 BRS3P32247 399 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 ARHGDIBP52566 201 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 ZNF137PP52743 207 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 ZNF816Q0VGE8 651 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-205ENST00000503401 CNPY1Q3B7I2 92 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 RPL39P5Q59GN2 51 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 CAPSLQ8WWF8 208 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 EDARADDQ8WWZ3 215 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 CFHR4Q92496 578 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 AGMATQ9BSE5 352 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 NXF2Q9GZY0 626 aaKnown RBP13.24□□□□□ -0.29
SCLT1-205ENST00000503401 DNHD1Q96M86 4753 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 STAB1Q9NY15 2570 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 A6NDX4 124 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 NFYAP23511 347 aaPredicted RBP13.23□□□□□ -0.29
SCLT1-205ENST00000503401 ARPC4P59998 168 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 RELBQ01201 579 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 TGIF2LXQ8IUE1 241 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 OR8H3Q8N146 312 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 DIRAS2Q96HU8 199 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 ADAM30Q9UKF2 790 aa13.23□□□□□ -0.29
SCLT1-205ENST00000503401 ZNF736B4DX44 427 aaPredicted RBP13.22□□□□□ -0.29
SCLT1-205ENST00000503401 CRYBA1P05813 215 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 LPLP06858 475 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 SNRNP70P08621 437 aaKnown RBP13.22□□□□□ -0.29
SCLT1-205ENST00000503401 OR8U9P0C7N5 309 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 CBX5P45973 191 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 DHRS7BQ6IAN0 325 aaPredicted RBP13.22□□□□□ -0.29
SCLT1-205ENST00000503401 H1FOOQ8IZA3 346 aaPredicted RBP13.22□□□□□ -0.29
SCLT1-205ENST00000503401 OR8U1Q8NH10 309 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 GPX8Q8TED1 209 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 ABHD1Q96SE0 405 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 ZNF251Q9BRH9 671 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 MRPL20Q9BYC9 149 aaKnown RBP13.22□□□□□ -0.29
SCLT1-205ENST00000503401 TOLLIPQ9H0E2 274 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 C1RLQ9NZP8 487 aa13.22□□□□□ -0.29
SCLT1-205ENST00000503401 ITGB1BP1O14713 200 aa13.21□□□□□ -0.29
SCLT1-205ENST00000503401 RAB29O14966 203 aa13.21□□□□□ -0.29
SCLT1-205ENST00000503401 LANCL1O43813 399 aa13.21□□□□□ -0.29
SCLT1-205ENST00000503401 DIRAS3O95661 229 aa13.21□□□□□ -0.29
SCLT1-205ENST00000503401 HNF4GQ14541 408 aa13.21□□□□□ -0.29
SCLT1-205ENST00000503401 ZNF833PQ6ZTB9 187 aa13.21□□□□□ -0.29
SCLT1-205ENST00000503401 PIPOXQ9P0Z9 390 aa13.21□□□□□ -0.29
SCLT1-205ENST00000503401 FAM90A9PA6NNJ1 464 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 IGKV1D-33P01593 117 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 IGKV1-33P01594 117 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 CTXN2P0C2S0 81 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 HKR1P10072 659 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 HES1Q14469 280 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 OR2D2Q9H210 308 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 PITPNC1Q9UKF7 332 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 ANAPC10Q9UM13 185 aa13.21□□□□□ -0.3
SCLT1-205ENST00000503401 RBM7Q9Y580 266 aaKnown RBP13.21□□□□□ -0.3
SCLT1-205ENST00000503401 PROP1O75360 226 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 FAM106CPP0CH98 169 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 HLA-DMAP28067 261 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 TNFSF8P32971 234 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 GPR12P47775 334 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 LINC00205P59089 165 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 HABP2Q14520 560 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-205ENST00000503401 DRAXINQ8NBI3 349 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-205ENST00000503401 OR5AP2Q8NGF4 316 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 OR52I2Q8NH67 350 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 S1PR3Q99500 378 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 NABP2Q9BQ15 211 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 SCPEP1Q9HB40 452 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 ZNF221Q9UK13 617 aa13.2□□□□□ -0.3
SCLT1-205ENST00000503401 TXNL1O43396 289 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 PMP2P02689 132 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 OR5H8P0DN80 308 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 RFX2P48378 723 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 RAG2P55895 527 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 LSAMPQ13449 338 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 IL18Q14116 193 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 GLDNQ6ZMI3 551 aaPredicted RBP13.19□□□□□ -0.3
SCLT1-205ENST00000503401 Q6ZSV7 163 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 LYSMD2Q8IV50 215 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 C5orf30Q96GV9 206 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 SLC25A33Q9BSK2 321 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 MMP27Q9H306 513 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 PTTG2Q9NZH5 202 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 KLK11Q9UBX7 282 aa13.19□□□□□ -0.3
SCLT1-205ENST00000503401 ANK2Q01484 3957 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 IGKV1D-13A0A0B4J2D9 117 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 TMEM89A2RUT3 159 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 CT45A6P0DMU7 189 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 CT45A5P0DMU8 189 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 CT45A7P0DMV0 189 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 IGKV1-13P0DP09 117 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 TMEM11P17152 192 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 NAT1P18440 290 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 MDKP21741 143 aaPredicted RBP13.18□□□□□ -0.3
SCLT1-205ENST00000503401 FCGR2CP31995 323 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 DGCR2P98153 550 aa13.18□□□□□ -0.3
SCLT1-205ENST00000503401 CDK10Q15131 360 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms