RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MLNRO43193 412 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 GRPP07492 148 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.84
USP46-204ENST00000503060 PDZD9Q8IXQ8 264 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 MSI2Q96DH6 328 aaKnown RBP9.77□□□□□ -0.84
USP46-204ENST00000503060 PHYHIPLQ96FC7 376 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 C18orf12Q96KH6 178 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 CNTNAP3BQ96NU0 1288 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 AQP10Q96PS8 301 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 REG4Q9BYZ8 158 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 CNTNAP3Q9BZ76 1288 aa9.77□□□□□ -0.84
USP46-204ENST00000503060 CEP250Q9BV73 2442 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.77□□□□□ -0.85
USP46-204ENST00000503060 IGHV3-64DA0A0J9YX35 117 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 SIRPB1O00241 398 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 KITLGP21583 273 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 GNRHRP30968 328 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 MDH2P40926 338 aaKnown RBP9.77□□□□□ -0.85
USP46-204ENST00000503060 HLA-DRB3P79483 266 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 TMEM41BQ5BJD5 291 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 LGI3Q8N145 548 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 RPRMLQ8N4K4 120 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 SECTM1Q8WVN6 248 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 GFOD1Q9NXC2 390 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 SLC25A15Q9Y619 301 aa9.77□□□□□ -0.85
USP46-204ENST00000503060 INTS1Q8N201 2190 aaKnown RBP9.76□□□□□ -0.85
USP46-204ENST00000503060 MPPED1O15442 326 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 PHF1O43189 567 aaPredicted RBP9.76□□□□□ -0.85
USP46-204ENST00000503060 SNAI2O43623 268 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 OR2H2O95918 312 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 GLI4P10075 376 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 RND3P61587 244 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 GTF3C1Q12789 2109 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 ZNF718Q3SXZ3 478 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 C5orf47Q569G3 176 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 FAM74A1Q5RGS3 127 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 LYZL2Q7Z4W2 148 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 LDLRAD3Q86YD5 345 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 OR4A4PQ8NGN8 299 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 RBPMSQ93062 196 aaKnown RBP9.76□□□□□ -0.85
USP46-204ENST00000503060 HARBI1Q96MB7 349 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 CXXC4Q9H2H0 198 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 CYTL1Q9NRR1 136 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 IGKV1D-13A0A0B4J2D9 117 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 C3orf85A0A1B0GTC6 90 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 MKRN2OSH3BPM6 223 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 K7EP13 123 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 GPR31O00270 319 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 TIMM8AO60220 97 aaPredicted RBP9.76□□□□□ -0.85
USP46-204ENST00000503060 IGKV1-13P0DP09 117 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 RCC1P18754 421 aaPredicted RBP9.76□□□□□ -0.85
USP46-204ENST00000503060 ZNF146Q15072 292 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 AKIRIN2Q53H80 203 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 ZNF474Q6S9Z5 364 aaPredicted RBP9.76□□□□□ -0.85
USP46-204ENST00000503060 PCSK4Q6UW60 755 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 PLPPR1Q8TBJ4 325 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 TP53RKQ96S44 253 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 SHARPINQ9H0F6 387 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 FZR1Q9UM11 496 aa9.76□□□□□ -0.85
USP46-204ENST00000503060 ZNF250P15622 560 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 TIMP3P35625 211 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 FABP6P51161 128 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 PSG3Q16557 428 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 SPIN3Q5JUX0 258 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 ZNF562Q6V9R5 426 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 ZNF818PQ6ZRF7 136 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 MOB1BQ7L9L4 216 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 TBC1D26Q86UD7 250 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 C11orf53Q8IXP5 236 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 GAPTQ8N292 157 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 TMEM56Q96MV1 263 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 CABLES2Q9BTV7 478 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 COL25A1Q9BXS0 654 aaPredicted RBP9.75□□□□□ -0.85
USP46-204ENST00000503060 HES4Q9HCC6 221 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 TMEM56-RWDD3S4R434 201 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 SH2D1BO14796 132 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 RAMP3O60896 148 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 DEDDO75618 318 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 TPT1P13693 172 aaKnown RBP9.75□□□□□ -0.85
USP46-204ENST00000503060 SRPXP78539 464 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 NAAAQ02083 359 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 FOXC1Q12948 553 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 FAM180AQ6UWF9 173 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 ZNF497Q6ZNH5 498 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 Q6ZR03 302 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 C1orf174Q8IYL3 243 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 DUX5Q96PT3 197 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 OR2S2Q9NQN1 319 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 CCL28Q9NRJ3 127 aa9.75□□□□□ -0.85
USP46-204ENST00000503060 LSM5Q9Y4Y9 91 aaKnown RBP9.75□□□□□ -0.85
USP46-204ENST00000503060 HKR1P10072 659 aa9.74□□□□□ -0.85
USP46-204ENST00000503060 RAB9AP51151 201 aa9.74□□□□□ -0.85
USP46-204ENST00000503060 C3orf36Q3SXR2 165 aa9.74□□□□□ -0.85
USP46-204ENST00000503060 ZNF324BQ6AW86 544 aaPredicted RBP9.74□□□□□ -0.85
USP46-204ENST00000503060 ZNF826PQ6ZT77 177 aa9.74□□□□□ -0.85
USP46-204ENST00000503060 ERASQ7Z444 233 aa9.74□□□□□ -0.85
USP46-204ENST00000503060 H1FOOQ8IZA3 346 aaPredicted RBP9.74□□□□□ -0.85
USP46-204ENST00000503060 FAM57AQ8TBR7 257 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms