RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 H0YJW9 148 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 H3BUA1 57 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 SC5DO75845 299 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 OR2A4O95047 310 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 RPSAP08865 295 aaKnown RBP11.75□□□□□ -0.53
HDAC6-236ENST00000498808 HTD2P86397 168 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 RPL39P5Q59GN2 51 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 LY6G6FQ5SQ64 297 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 RAB12Q6IQ22 244 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 FAM71F2Q6NXP2 309 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 ZNF343Q6P1L6 599 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 LHFPL3Q86UP9 236 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 OR5T1Q8NG75 326 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 GRPEL2Q8TAA5 225 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 S100A13Q99584 98 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 ALG8Q9BVK2 526 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 GABARAPL3Q9BY60 117 aa11.75□□□□□ -0.53
HDAC6-236ENST00000498808 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
HDAC6-236ENST00000498808 OR5H14A6NHG9 310 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 ST8SIA5O15466 376 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 ZNF780AO75290 641 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-236ENST00000498808 MAS1P04201 325 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 GSTP1P09211 210 aaKnown RBP11.74□□□□□ -0.53
HDAC6-236ENST00000498808 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-236ENST00000498808 PSG5Q15238 335 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 ATP6AP1Q15904 470 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 TATDN3Q17R31 274 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 RPEL1Q2QD12 228 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 SYS1Q8N2H4 156 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 OR2AK2Q8NG84 335 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 TMEM138Q9NPI0 162 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 EXOGQ9Y2C4 368 aaKnown RBP11.74□□□□□ -0.53
HDAC6-236ENST00000498808 GMPPBQ9Y5P6 360 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 PEX16Q9Y5Y5 336 aa11.74□□□□□ -0.53
HDAC6-236ENST00000498808 CA11O75493 328 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 RBBP9O75884 186 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 FXYD3Q14802 87 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 DMKNQ6E0U4 476 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-236ENST00000498808 ZNF554Q86TJ5 538 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 ZDHHC13Q8IUH4 622 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 OR5AN1Q8NGI8 311 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
HDAC6-236ENST00000498808 ORAI1Q96D31 301 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 LGALS12Q96DT0 336 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 PARP12Q9H0J9 701 aaKnown RBP11.73□□□□□ -0.53
HDAC6-236ENST00000498808 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 POMPQ9Y244 141 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 WASHC3Q9Y3C0 194 aa11.73□□□□□ -0.53
HDAC6-236ENST00000498808 A0A0J9YWU9 116 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 UBE2QL1A1L167 161 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 H7C2Y5 167 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 SLC22A1O15245 554 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 RBMXL2O75526 392 aaKnown RBP11.72□□□□□ -0.53
HDAC6-236ENST00000498808 BDKRB2P30411 391 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 GTF2A1P52655 376 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-236ENST00000498808 BVESQ8NE79 360 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 GHSRQ92847 366 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 MRPL48Q96GC5 212 aaKnown RBP11.72□□□□□ -0.53
HDAC6-236ENST00000498808 RNF5Q99942 180 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 PIPOXQ9P0Z9 390 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 PEMTQ9UBM1 199 aa11.72□□□□□ -0.53
HDAC6-236ENST00000498808 RAB29O14966 203 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 CD2P06729 351 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 AADACP22760 399 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 MC5RP33032 325 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 PPP3R1P63098 170 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 DEFB114Q30KQ6 69 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 SLC25A30Q5SVS4 291 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 SIGIRRQ6IA17 410 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 GPR148Q8TDV2 347 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 TRUB1Q8WWH5 349 aaKnown RBP11.71□□□□□ -0.53
HDAC6-236ENST00000498808 GALMQ96C23 342 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 ZNF184Q99676 751 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-236ENST00000498808 TINAGL1Q9GZM7 467 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-236ENST00000498808 IMPAD1Q9NX62 359 aa11.71□□□□□ -0.53
HDAC6-236ENST00000498808 KLK5Q9Y337 293 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-236ENST00000498808 DNAH6Q9C0G6 4158 aa11.71□□□□□ -0.54
HDAC6-236ENST00000498808 AIREO43918 545 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 SPDEFO95238 335 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 IGKV1-16P04430 117 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 EDN2P20800 178 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 MRPL28Q13084 256 aaKnown RBP11.7□□□□□ -0.54
HDAC6-236ENST00000498808 GPR176Q14439 515 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 GUCA2BQ16661 112 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 AMIGO2Q86SJ2 522 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 ABHD14BQ96IU4 210 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 BANF2Q9H503 90 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 ZC4H2Q9NQZ6 224 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 ERVK13-1Q9NX77 482 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 AASSQ9UDR5 926 aa11.7□□□□□ -0.54
HDAC6-236ENST00000498808 H3BNX3 289 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 BMPR1BO00238 502 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 GLAP06280 429 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 FUT3P21217 361 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 GBX2P52951 348 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-236ENST00000498808 SNRPGP62308 76 aaKnown RBP11.69□□□□□ -0.54
HDAC6-236ENST00000498808 GNGT1P63211 74 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 TNFRSF9Q07011 255 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 HMGN3Q15651 99 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms