RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PKIAP61925 76 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 HERPUD1Q15011 391 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 MSMO1Q15800 293 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 ZNF726P1Q15940 193 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TAF9Q16594 264 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 LRRC75BQ2VPJ9 315 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 ABCA11PQ4W5N1 156 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 NCMAPQ5T1S8 102 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 CARD17Q5XLA6 110 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 LCN10Q6JVE6 187 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 PET117Q6UWS5 81 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TBC1D26Q86UD7 250 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 ZNF383Q8NA42 475 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 OR2V1Q8NHB1 315 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 FAM110DQ8TAY7 271 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 FAM213BQ8TBF2 198 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 SSX3Q99909 188 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 LINC00470Q9BZP3 86 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 RIMS4Q9H426 269 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 SRD5A3Q9H8P0 318 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 ZNF701Q9NV72 531 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 KLRF1Q9NZS2 232 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 POLR1DQ9Y2S0 133 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 RFNGQ9Y644 331 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 RALGAPA1Q6GYQ0 2036 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TNRC6AQ8NDV7 1962 aaKnown RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 LOC400499M0QZD8 3231 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 IGHV1-45A0A0A0MS14 117 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TGIF2-C20orf24A0A0A6YYL0 155 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 A0A0J9YW62 118 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 ZNF816-ZNF321PA0A0X1KG74 233 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 C9J4A7 227 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TP53I11O14683 189 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 PHF1O43189 567 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 SPRY1O43609 319 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 PGLYRP1O75594 196 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 OR2J2O76002 312 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 IGLV2-14P01704 120 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TRGC1P0CF51 173 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TMEM11P17152 192 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TCN2P20062 427 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 CAMPP49913 170 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 UBE2KP61086 200 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 FGF12P61328 243 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 SERF2P84101 59 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TLE4Q04727 773 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 ZNF616Q08AN1 781 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 EIF4EBP1Q13541 118 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 JOSD1Q15040 202 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 MPV17LQ2QL34 196 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 CXorf66Q5JRM2 361 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 WDR25Q64LD2 544 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 SLC25A26Q70HW3 274 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 GGNQ86UU5 652 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 HAPLN4Q86UW8 402 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 OR5D18Q8NGL1 313 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 KCNE4Q8WWG9 221 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 RLN3Q8WXF3 142 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 FRZBQ92765 325 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 GPR146Q96CH1 333 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 RAB40CQ96S21 281 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 CITED2Q99967 270 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 C20orf24Q9BUV8 137 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 SRXN1Q9BYN0 137 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 OR2H1Q9GZK4 316 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 METTL7AQ9H8H3 244 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 C19orf25Q9UFG5 118 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 RNF150Q9ULK6 438 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 WSB1Q9Y6I7 421 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 PTPRBP23467 1997 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 KIAA1549Q9HCM3 1950 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 IGKV3D-15A0A087WSY6 115 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 MED19A0JLT2 244 aaPredicted RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 LRP5LA4QPB2 252 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 PATE3B3GLJ2 98 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 NPIPB6E9PJ23 425 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 F5H5K5 113 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 OPN1MWP04001 364 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 OPN1MW2P0DN77 364 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 OPN1MW3P0DN78 364 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 OPRM1P35372 400 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 NOVA1P51513 510 aaKnown RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 NDUFA6P56556 154 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 MLF1P58340 268 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 OR2B8PP59922 312 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 PSG4Q00888 419 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TRIP6Q15654 476 aaKnown RBP3.3□□□□□ -1.88
CLTC-209ENST00000498711 VWC2Q2TAL6 325 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 PIGYQ3MUY2 71 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 TSPO2Q5TGU0 170 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 ZNF818PQ6ZRF7 136 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 FOXRED2Q8IWF2 684 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 ZNF525Q8N782 197 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 CYB561D1Q8N8Q1 229 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 HSD17B11Q8NBQ5 300 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 NAT6Q93015 286 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 SLAMF9Q96A28 289 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 BORCS8Q96FH0 119 aa3.3□□□□□ -1.88
CLTC-209ENST00000498711 MRPL37Q9BZE1 423 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms